Camelina sativa (false flax): 104725022
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Entry
104725022 CDS
T05044
Name
(RefSeq) nuclear cap-binding protein subunit 2 isoform X1
KO
K12883
nuclear cap-binding protein subunit 2
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
csat03015
mRNA surveillance pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104725022
09122 Translation
03013 Nucleocytoplasmic transport
104725022
03015 mRNA surveillance pathway
104725022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104725022
03041 Spliceosome [BR:
csat03041
]
104725022
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
104725022
Spliceosome [BR:
csat03041
]
Common components
Common spliceosomal components
Cap binding complex
104725022
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
104725022
NCBI-ProteinID:
XP_010441916
UniProt:
A0ABM0UJ51
LinkDB
All DBs
Position
11:33450364..33452811
Genome browser
AA seq
255 aa
AA seq
DB search
MASLFKEQAKLSAYRDRRFSGTQEEFDEALRTSTTVYIGNVSFYTTEEQLYELFSRAGEI
KKIIMGLDKNTKTPCGFCFVLFYSREDTEDAVKYVSGTILDDRPIRVDFDWGFQEGRQWG
RGRSGGQVRDEYRTDYDPARGGYGKLVQKELEAQRQLVDYGTGSLGSYPQAAPSNYGRRG
GYNQGGSNRQGRGGGDYHRKRQRDDDRYGRDNSRRNTDHESRRDTDQDMRPEKNPRFRES
GDSDDDGDDDRKRRS
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttgttcaaggagcaagctaagctctcggcttatcgagataggagattctca
ggaacacaagaggagttcgatgaggcgctaaggacatctacgactgtttacattggcaat
gtgtctttctacacaactgaagaacagctttacgagcttttctctagagcaggagagatt
aaaaagatcatcatgggtttggacaagaacactaagactccctgtggcttttgtttcgtc
ctgttctactcgagggaggatactgaagatgcagtcaaatatgtaagtgggactattctt
gatgaccggcccattcgtgtggattttgactggggattccaagaaggaagacaatgggga
cgtggtagaagtggtggccaggttcgagatgaataccgtacagattacgatcctgctaga
ggtggttatggaaagttagttcagaaggaacttgaagcacaaaggcagctcgtagattac
ggtactggctcattgggatcttatcctcaagctgcgccatcgaattatggaaggcgtggt
ggatataatcaaggaggatcaaatcgccagggaagaggaggaggagactaccatcgcaaa
cgtcaaagagacgatgatcgctatggacgtgacaactcaagaagaaacacagatcatgag
tctaggagagatactgatcaggacatgagaccggagaagaacccacgattccgtgagagc
ggtgactcggacgatgacggtgacgatgatcggaagagaagatcttaa
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