Camelina sativa (false flax): 104725159
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Entry
104725159 CDS
T05044
Name
(RefSeq) transcription initiation factor TFIID subunit 4b
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
csat
Camelina sativa (false flax)
Pathway
csat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104725159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104725159
03036 Chromosome and associated proteins [BR:
csat03036
]
104725159
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104725159
Coactivators
SAGA/TFTC/STAGA complex
104725159
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
104725159
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
104725159
NCBI-ProteinID:
XP_010442067
UniProt:
A0ABM0UJI0
LinkDB
All DBs
Position
11:34766185..34772198
Genome browser
AA seq
819 aa
AA seq
DB search
MDPSIFKLLEEDEDESMHSGADVDAFQAALNRDIEGSMTTSMPLGTNPGNNHPPSQQFAP
WKNGIGDANINVQTQHSLESTQMKEQQGSTLENQHQHDLKRANESHLQHNQPQDLHRAGQ
LWENPSQVPQTIGLPISEKNPTGNEPDRSHNVQESESQYVKLQKMSSQQARGVEPSANPM
NRNPKQVPFAALLPTLMAQLDKDRALQLRTLYARLKKNEIPKEGFTRHMKDIVGDQMLRL
AVSKLQQMNYNQGKIGIQAPSTEINNQKSQSDPRAVHLNQLPSSTSGTLGSSATVQGLTK
HPQHQMQHPPSSFPMYTTSGSYHTYPGPNTNASGSALRPHLHDSHMRHGAHNPTVGSTGL
GGPPQSTTNMMTMPKFERPSSVNDPNRVQGGVTSHFQNSSSLPLNSAPGQGSLVSLVKQE
SVDQSFEKNNATSVTSNEDLEKDSSRMGLSTPNNMAPASSVSPSMTTQLDASTTMNSRGP
LGTSQGGINARMPPKKPSVGQKKPLETLGSSPPPPSKKQKVAGNSMDQSIEQLNDVTAVS
GVNLREEEEQLFSGAKEDARVSEASRRVVHEEEERLILHKNPLQRKLAEIMAKAGIKQIS
NDVERCLSLCVEERMRGLLSHIIRLSKQRVDAEKSRHRTFITSDIRLQINEMNQKVKEEW
EKKQAEAEKLKKPSESEEGDGGVDSEKEKEDNRSKGVKVNKEDDDKMRTTAANVAARAAV
GGDDTFLKWQLMAEARQKSVSEGGKDGSQKATSGGGKNSKDRQDGGRRFSGNGGRRVGKN
QGSSPQPKVVRTITVKDVVAVLEREPQMSKSTLMYRLIQ
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggatccttcaattttcaagctccttgaagaagacgaggatgagtcgatgcattcggga
gctgatgtagatgctttccaagctgctctgaatcgagatattgaaggttctatgacaact
tcaatgccactcgggacgaatcctggaaacaaccatcctcccagccagcagtttgcgcca
tggaagaatggtattggagatgctaatatcaatgtccagacgcagcacagccttgaaagt
actcagatgaaggagcaacaaggatcgactttagaaaatcaacatcaacatgatttgaaa
cgagccaatgaatctcatttacaacacaaccagcctcaagaccttcatcgagcaggtcaa
ctgtgggagaatccatcgcaggtaccccaaacaattgggttgccgatttctgaaaagaat
cctactggtaatgaaccagatagatcacataatgttcaagagagtgaatctcagtatgtg
aaactgcaaaagatgagtagtcaacaggctcggggagtggaaccgtctgctaaccctatg
aaccgcaaccctaagcaagtaccatttgctgctttgcttcctaccttaatggctcaactc
gataaagatagagcactgcagctccgtaccttatatgctagacttaagaaaaatgaaatc
cccaaagaggggttcacaagacatatgaaggatattgtaggcgatcagatgctcaggttg
gcagttagtaaactgcagcagatgaactataaccaaggaaaaattgggattcaagctcct
tctactgaaatcaataatcaaaaatcgcagtctgatcctcgggcagtccaccttaaccaa
ctaccttcctcaacttcaggcaccttaggcagttcagctacggtgcagggacttaccaaa
catccgcagcaccagatgcagcatccaccaagttcttttcctatgtatactacctctggt
agttatcacacatatcccggtccaaacaccaatgcttctggttccgcgttgagaccgcac
cttcatgattcccatatgagacatggggcacataacccgactgtgggatcaactggtctt
ggaggacccccccaatctaccacaaacatgatgactatgcccaaatttgagaggccaagt
tctgtaaatgacccgaatagggttcaaggtggcgttacatcacacttccagaacagctca
tcattacctctaaattctgcacctggtcaaggatcattagtgtcccttgttaagcaagaa
tcagttgatcaaagttttgaaaagaataatgcaacctcagtaacttcgaatgaggactta
gagaaggattcctctagaatgggtttatcaacacctaacaacatggcgcctgcaagctct
gtatctccttccatgacaactcaactagacgctagtacaacaatgaattctcgtggccca
ttaggaacctctcaaggaggaattaatgctaggatgccacccaaaaagccttctgttggt
cagaaaaaacctctggagacattaggttcttcacctccaccaccaagtaagaagcaaaaa
gtagcagggaattctatggatcaaagtattgaacagctcaatgatgtcactgcagtcagt
ggtgttaatctcagggaagaggaagaacaattattctctggggccaaggaggatgctcgt
gtttccgaagcatctcggagagttgtgcacgaagaagaagaaagattaatcttgcataaa
aatccgctgcaaagaaaactggcggaaattatggcgaaagcgggtataaagcagataagc
aatgatgtcgaaaggtgcttgtctttgtgtgtggaggaaaggatgcgaggattattatcc
catataattcggttgtcaaagcagcgggttgatgctgagaaatctagacaccggactttt
atcacatcagatattcgcctacaaattaatgaaatgaaccagaaggtgaaggaagaatgg
gagaagaagcaggctgaagctgaaaagcttaagaaaccgagtgagagtgaagaaggtgat
ggtggagttgacagtgagaaggagaaagaagataaccgttcaaagggtgtgaaggtaaat
aaggaggatgatgacaaaatgagaacgacagctgcaaatgttgctgctcgtgctgctgtc
ggaggagatgatacatttttaaaatggcaattaatggctgaagctcgtcaaaaatctgta
tctgaaggtggtaaagatgggagtcagaaagctacttcaggtggaggaaagaactctaag
gacaggcaagatggtggacgacggttttctggaaatggtggtcgaagagtagggaaaaac
caaggttcgtctcctcaaccaaaagtggtaaggacaatcactgtgaaggatgtggttgct
gttttggagagagagccgcagatgtccaaatccactttaatgtatcgattaattcaatag
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