KEGG   Camelina sativa (false flax): 104725294
Entry
104725294         CDS       T05044                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
csat  Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:csat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csat03036]
    104725294
   03400 DNA repair and recombination proteins [BR:csat03400]
    104725294
Chromosome and associated proteins [BR:csat03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    104725294
DNA repair and recombination proteins [BR:csat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     104725294
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT TPR_Trm732_C HEAT_EZ
Other DBs
NCBI-GeneID: 104725294
NCBI-ProteinID: XP_010442227
LinkDB
Position
11:complement(36413670..36421038)
AA seq 1135 aa
MVETNQLTQYLGTFVDITRSPTEQDDSLKAIASSLDNDSLSINQLIREMEMYLTTTDNVV
RARGILLLAEVLDSLKAKPLANAIVHTLVGFFTEKLADWRALRGALVGCLALMKRKDVAG
VVTDIDAQAMAKSMVQNVQLQALAPLDRKLGFELLECLLQQYSEAMSTMGNLLVYAICEA
IDGEKDPQCLIVAFHLIELLAQLFPSPSGPLASDASDLFEVFGCYFPLHFTHTKDDEANI
RREDLARGLSLAISSTPLFEPYAIPLLLEKLSSTLPIAKVDSLKCLKDCAMKYGVDRMKK
HYGGLWSALKDTFYSSTGTHLSFSLESITSPGFEMNEIHNEAVSLLQRLVKQDISFLGFV
VEDIRINTVFDTISRYSQFRGMPDTSKLEVLVISQILSVSAKASVQSCNIIFQTCFFRLM
NTLGIVEKTSNGDVVQNGNSTVSTRLYHGGLHLCIELLAASKDLTLGFEECSPTPECVQE
SWCSMVKRFSVPLIQVFASAVYSSSDDSVADVYLGVKGLLTMGMFCGGSSPVSRSEFEKI
LVTLTSIITSKSGKTMMWELALKALVCIGSFIDRYHETDKAMSYMSIVVDNLVSLACPGH
CGLPYPMMLEATSEVCSTGPKYVEKLVLGLEEAFCSSLSDFYVNGNFKSINNCSHLLGCL
TNKLLPRVGEIDGLEKLLVHFAISMWNQIESCGVFSCDFNGGQEFVEAAITTMGQIVGIA
LVDSQNSIIQKAYRVVLPSTLAAMKSIPLTFVALEDLQRDLSTRDELILSLFASVIIAAS
PAASIPDAKSLIHLFLVSLHKGYIPAAQALGSMVNKLGRGTGGAYITSGCSMEEACDIIF
QADFASEEKISSNGSGKFICGSETTLSKICLGFCGSLEHQTHAITGLAWIGKGLLMRGDE
RVNEIALLLVECLKSTNCSGHALHPSAMKHAADAFSILMSDSEVCLNRKFHAVIRPLYKQ
RFFSKIVPILESLIMNFQTPLSRKMLHVALAHVISNVPVTVILDNTKKLQPMILEGLSVL
SIDSVEKETLFSLLLVLSGTLTDSKGQQSAEDNAHIIIECLVKLTSYPNLMVVRETAIQC
LVALLELPHRRIYPFRIQVLQAIAKSLDDPKRRVRGEAIKCRQAWASITSTNIPF
NT seq 3408 nt   +upstreamnt  +downstreamnt
atggtagaaacgaatcagctcacacagtatctcggaacttttgttgacattactcgttcc
cctactgagcaggatgatagtcttaaagcgattgcttcttccttggataatgattctttg
tctattaaccaattgattagagagatggagatgtatttgacgacaactgataacgttgtt
cgagcacgaggtattctcctgcttgcggaggttctcgattctctgaaagcgaagccgtta
gccaatgcaattgttcatactctcgttggattcttcaccgagaagctggcagattggaga
gcgttgcgtggggcacttgttggttgcttggccttaatgaagaggaaagatgtagctggt
gtggtcactgacattgatgcacaagctatggcgaagtcaatggtacagaatgtgcaactg
caggctttagcaccgcttgaccgcaagcttggttttgaacttctggagtgccttctacaa
caatactctgaagctatgtccactatgggtaatctacttgtctatgctatatgtgaagcc
atcgatggagaaaaagaccctcaatgcttaatagtagcttttcatctaattgagcttttg
gctcaattgttccccagtccttctggtccacttgcttctgatgcatctgatctttttgag
gtttttggttgctacttcccacttcattttacgcatacaaaagacgatgaagctaatatt
agaagagaggacctcgcaaggggactatcgttggcgatctcttcgacacctttgtttgaa
ccttatgctattccgttgcttcttgaaaagctttcttctactctacctatcgcaaaggtt
gattctttgaaatgtctgaaagattgcgctatgaagtatggagtagacagaatgaagaag
cattatggaggtctttggtccgctttgaaagatacattttattcttccactgggacacac
ttgtccttctctctagaatccatcactagtccagggtttgaaatgaatgagattcacaat
gaagctgttagccttcttcagaggcttgttaagcaagatatctcctttttaggtttcgtc
gttgaggatatacgtataaacacggtctttgataccatctctagatactctcagtttagg
ggaatgcctgacacaagcaaactggaggttcttgttatcagtcagatactgtctgtttct
gccaaagcttcggttcagtcatgcaatataatctttcaaacctgtttcttccgccttatg
aacactctaggaattgtagagaaaacttctaatggcgatgttgttcaaaacggaaactct
acggtctctaccagactctatcatggaggtcttcatctttgcatcgaacttcttgcagca
tcaaaagaccttaccctgggtttcgaggaatgttctccaacacctgaatgtgtacaggaa
tcatggtgctctatggtgaaaagattctcagttccattgatccaggtgtttgcttctgca
gtatacagctctagtgatgattctgttgcggatgtatatcttggagtaaagggtttgcta
actatgggtatgttttgtggtggctcttctcctgtatcgagatctgaattcgagaagatt
ttggtgaccttaacatcaatcatcacatccaagagtggtaaaacaatgatgtgggaactg
gcgttgaaagcattggtctgcatcggctcatttattgatcggtatcatgagactgacaag
gctatgagctacatgagtatagttgtcgacaatttggtctcattggcatgtcctggtcat
tgtggtcttccatatccaatgatgctagaagcaacttcagaagtttgctccactgggcca
aagtatgtggagaaactggttctaggattggaagaagctttttgttccagtttgtctgat
ttctatgtcaatgggaacttcaagtcaattaacaattgctctcatctcctggggtgttta
accaacaagttgcttccacgtgtgggcgagatagatggtctcgagaaactcttggtgcat
ttcgctatcagtatgtggaatcaaattgaatcctgtggagttttcagttgtgattttaat
ggtgggcaggagtttgttgaggcagcgatcacaacaatgggccaaattgttggaattgca
ttagtagattcacagaacagtataatccaaaaagcttatagagtggtcttgccaagcacg
cttgcagctatgaagtctattcctttgacctttgttgcattagaggatcttcaacgtgac
ctgtccactagggatgaattgatactttcactattcgcatcagttatcatagccgcatct
cccgcagcatccattccagatgcgaaatcacttatacatctgtttttggtctcacttcat
aagggttatatcccagcagctcaagctttggggtcaatggttaacaaattgggccgaggt
accggtggagcatatatcacaagcggttgttccatggaagaagcatgtgatataatattt
caagcagattttgcatcggaagaaaagatttcttccaatggatctggtaaatttatatgt
ggaagtgagacaaccttatcaaaaatatgtttaggtttctgtggttctctggagcatcaa
acccatgctatcacaggactagcatggattgggaaaggtttactcatgcggggtgatgaa
agagtcaatgaaatagctctgctactagtggagtgcttaaaatccaccaattgttccggg
catgctctacatccttctgccatgaaacatgcagcagacgcattctcgatattaatgtct
gattctgaagtgtgtctgaacagaaaatttcatgcagtcatacggccactctataagcag
cgatttttctctaaaatagttcccattttggagtctttgattatgaatttccagactcca
ctatcgagaaaaatgttgcatgtagctctcgcgcatgttatatccaatgttccagtaacg
gtcatattggacaataccaaaaagctacaaccgatgatactggaaggcttgtctgtttta
agcatagactctgtggagaaagaaacgctctttagtttattactggttttatctggaacg
cttactgattcgaaaggacaacaatctgccgaagataatgcgcatataatcatcgaatgc
ctagtcaagcttacatcatatccaaatctaatggttgttagggagacagcgattcagtgt
cttgttgcgctgttggaattgccgcatagaagaatttatcctttcagaatacaggtttta
caagcaatagcaaagtcactcgatgatccaaaacggagagttcggggagaagcaattaaa
tgcaggcaggcttgggcgtcaatcacatccacgaatatcccattctga

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