Camelina sativa (false flax): 104725735
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Entry
104725735 CDS
T05044
Name
(RefSeq) WD repeat-containing protein RUP1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat04120
Ubiquitin mediated proteolysis
csat04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104725735
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
104725735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104725735
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104725735
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104725735
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104725735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_DCAF12
WD40_like
Beta-prop_SCAP
Beta-prop_DCAF4
PQQ_2
YNR034W-A-like
Motif
Other DBs
NCBI-GeneID:
104725735
NCBI-ProteinID:
XP_010442746
LinkDB
All DBs
Position
11:40496119..40497453
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AA seq
381 aa
AA seq
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MEALFCSEIPNNNIRSSINDLCYSSSSSYTWPTIMTSSSTVMNTDNIPRCDWDLSLSAVV
SSASTGSDAIGTIEFDPSGEIIATGGIARKIRTYRLSSLLRSRDDHVTASESCICTPAKL
SSLRWRPDLSGRVIGSGDYDGVVTEYDVEKQVPVFERDEHGGRRIWSMDYTLHNGSLIGA
SGSDDGTVQMWDPRNGGSLEGTVRPGGGAAICSVEFDPFGGSSLAVGCADRNAYVYDIRR
LVDPLIVLDGHTKTVTYARFMNSHTIVTGSTDGSLKQWDINNGRRVVRTYRGHVNSRNFV
GLSVWRHGGLVVSGSENNQVFVYDKRWEEPVWVCELGQTDRFGSDRRFVSSVCLRQVDED
WCTLVAGGSDGVLEIFSGIRS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggaggctttgttctgctctgagataccaaacaacaacatcagatcctccattaacgat
ctctgttactcttcttcttcttcatatacatggccaacaatcatgacctcctcttccaca
gtcatgaacacagataacattcctagatgcgactgggatctttctctctcggccgttgtt
tcctccgcatccaccggatcagacgctatcggaacaatcgagttcgacccgagcggagag
atcatagctacaggaggtatcgcaagaaagatcagaacgtatcgtttgagttctttgtta
aggtcacgtgacgatcacgttacggcttcagagagctgtatatgcacgccggcgaagcta
agcagtctcagatggagacccgatttatctggtcgggttatcgggtctggagactacgac
ggggttgtcacggagtacgacgttgagaaacaagttcctgttttcgagagagacgagcat
ggaggtagaaggatttggagcatggactacacgctacacaatggctctcttataggcgcg
tcggggtccgacgacggaacggttcaaatgtgggatccacgtaacggagggtcgttggaa
ggaacggttaggcccggaggcggcgcggcgatctgttcggtagagtttgatcccttcggt
ggatcttcgttagccgtcggatgcgctgaccggaatgcttacgtgtacgacatcagaaga
ctcgttgaccctttgatcgtattagacggtcataccaaaacggtgacgtatgctcggttc
atgaattctcatacgatcgtcaccggttcgaccgacgggagcttgaagcaatgggatata
aacaacggacggcgcgtagttcgaacgtaccgggggcatgttaatagccggaactttgtc
gggttgtcggtttggagacatggtggtttggtcgtgtccgggtcggagaataaccaagtg
tttgtgtatgataagaggtgggaggaaccggtttgggtgtgtgagttgggtcaaacagat
cggtttgggtctgaccgacggttcgtgagcagtgtgtgtttgagacaagtggatgaagat
tggtgcacacttgttgccggaggatccgatggggttttagagattttctcgggcatacgg
agctaa
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