Camelina sativa (false flax): 104725961
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Entry
104725961 CDS
T05044
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog
KO
K20307
trafficking protein particle complex subunit 10
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104725961
Membrane trafficking [BR:
csat04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
104725961
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
NTS_TR130
bL31_N
TPR_2
Motif
Other DBs
NCBI-GeneID:
104725961
NCBI-ProteinID:
XP_010443017
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All DBs
Position
11:complement(42202660..42212594)
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AA seq
1259 aa
AA seq
DB search
MANYLAQFQTIKNSSDRLVAAVEDVSDLWPTVKGLFEEHQPLKRAFLTNKTRNPVFIENL
PVEFILTTDARLRSRFPQEQYLFWFREPYATIVLVTCEDLDEFKNILKPRLKLIVQNDER
EWFIVFVSKAHPSNDQATKSVKKVYAKLEVEFSSKKRERCCKLDVHGPDGNFWEDLELKI
TECIRNTLDRRAQFYEDEIRKLSEQRFMPIWNFCNFFILKESLAFIFEMAHLHEDALREY
DELELCYLETVNMPGKQRDFGGFDSEDDQAALLKPGSKPLTQIVQDDSFREFEFRQYLFA
CQSRLLFKLNRPFEVASRGYSFVISFAKALTLHESVLPFCMREVWVITACLALIEATASH
HHDGVVAPDIEKEFYRLQGDLYSLSRVKFMRLGYLIGYGTDIEKSPLNSACLSMLPWPKP
AVWPSLPQDASSEVLEKEKTILQATLRTKHFGIQQKALPLEPSVLLRVANRRRASLSTGN
IPEIFDGRPSFTEGSGLEASPRTPSSLKVQAASMSRTNSSPGNFESPLDRPMRLAEIFVA
AEHALRLTISDNDLLKTLSSIQDFENKYLNLTKGAAENYHRSWWKRHGVVLDGEIAAVCF
KHGKYDLAANSYEKVCALYAGEGWQDLLAEVLPNLAECQKILNDQAGYMSSCVRLLSLDK
GLFSSKERQAFQSEVLTLAHSEMKNPVPLDVSSLITFSGNTGPPLQLCDGDPGNLSVTVW
SGFPDDITLDSLSLTLVATNNTDEGGQALKSSAATVLKPGRNTITFALPPQKPGSYVLGV
VTGQIGRLRFRSHSFSKGGPADSDDFMSYEKPTRPILKVSKPRALVDLAAAVSSALLINE
AQWIGIIVRPIAYSLKGAILHIDTGPGLKIEDSYGIEMESYMDTDCDASASKSDVFVEDS
PVPPIRDSEVLNLCDGKIVFSDWASNVSSILWVPVRALSEKLARGSSSVNPLKQDILEGM
RTVALKLEFGVHHNQIFERTIAAHFTDPFDVTTRVANKCNDGTLVLQVMLHSLVKANLIV
LDAWLDLQDGFVHGQNDGRPTSTFFPLVVSPGSRAAVVFSLCLDKTMSSEGKDLQLPESI
LNIKYGIHGDRAAGAHKPVDADNSGTDTEGRDLVFKSAIVLQRPVLDPCLTVGFLPLSSD
GLRVGKLITMQWRVERLKDLKESEAVEQEHDEVLYEVNANSENWMIAGRKRGHVSLSEEQ
GSRVVISILCVPLVAGYVRPPQLGLPNVEEANVSSNPPGPHLVCVLPPLLSSSYCIPVK
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactacttggctcagttccagacgattaagaattcctccgatcgtctcgtcgcc
gccgtggaagatgtgtctgatctgtggcctacagtgaaaggtttatttgaagaacatcag
ccattaaaaagagcgttcttgacaaacaagactcgaaatccggtttttattgagaacttg
ccggttgaattcatattaactacagacgcgagacttcgtagtcgattcccgcaggagcaa
tatttgttctggtttcgagaaccatatgcaactatagttcttgtgacgtgtgaggatctt
gatgagtttaaaaacattctcaaaccacgtctaaaattaattgttcaaaatgatgagagg
gaatggtttattgtatttgtatctaaagctcatccaagtaatgatcaagcaactaagtct
gtcaagaaagtatatgcgaagcttgaagttgagttcagttcaaaaaagagagaaaggtgc
tgtaagctggatgtacatggccctgacggaaacttttgggaggatctggaattaaagatt
accgagtgcatcaggaataccttggataggcgcgcacaattctacgaggatgagatacgc
aagctcagtgagcagcggtttatgccaatatggaacttttgtaactttttcatcttgaag
gaaagtttggctttcatatttgagatggctcatcttcatgaggatgcattacgtgaatat
gatgaactagagctctgctatttggaaacagtgaatatgcctgggaaacagagggatttt
ggaggattcgacagtgaagatgaccaagctgcgctgttgaaaccaggaagcaaaccattg
acacagattgtgcaagatgattcttttagagaattcgagtttagacagtatctctttgcc
tgtcaatctaggctgttgttcaaattgaatcgtccttttgaagttgcatcgaggggatac
tcttttgttattagttttgcaaaggccttaaccctccatgagagtgtactgcccttctgt
atgcgggaagtttgggtaattactgcatgtttagcgctgattgaagcaactgcttctcat
caccatgatggagtggttgcacctgatatagagaaggaattctaccgtcttcagggtgat
ctctattcactttcacgggttaagttcatgagacttggatatctgataggatatggaaca
gacatagaaaagagtccactgaacagtgcttgtctcagtatgctgccttggccaaagccg
gcagtctggccatctcttccacaagatgcttcctctgaggtgcttgaaaaagaaaagact
attctccaagcaactttaaggaccaagcactttggtattcaacagaaagctttacctctt
gaaccatctgtccttttacgtgtggctaacagaagaagggcttctctttctactggaaat
attcctgaaatatttgatgggcgcccaagttttaccgaaggatcaggtttagaagcatct
ccgagaacaccttcatctcttaaagtacaagcagcttctatgtcgagaacaaattcttca
cctggaaactttgagagtcccctagataggcctatgcggcttgctgaaatttttgttgca
gctgagcacgctctgcgacttaccatttcagataatgatttgttgaagacattgtcatct
attcaggattttgagaataaatatcttaacctaactaaaggtgctgccgaaaactatcac
cgttcttggtggaagagacatggagtcgttcttgatggggaaattgcagctgtctgcttc
aagcacggaaagtatgatttggctgcaaactcttatgaaaaagtttgtgccctttatgcg
ggtgaaggatggcaagatttactggcagaagtcttacctaatttagctgagtgtcaaaag
attcttaacgatcaagctgggtacatgtcatcttgtgttagactactttcgttggataaa
ggtttattctcgtccaaggagcggcaagcttttcagtccgaggttcttactcttgcacac
agtgaaatgaagaacccagttcccttagatgtgtcatcgttgatcacgttttctggaaac
actggccctccacttcagctgtgtgatggagaccctgggaatctatctgttactgtatgg
agtggctttcctgatgatatcacccttgattcgcttagtcttactttggtagccaccaac
aacactgacgaaggcggccaggctttaaagagttccgctgcaactgtgctaaagcccgga
aggaatactatcacttttgctttgcctccacaaaaacctggttcctatgtcttgggagtc
gtcactggccagattgggcgcttgagattcaggtctcacagcttttcaaagggtggtccc
gcagatagtgatgacttcatgagttatgaaaagccaaccagacctatcctgaaggtttcc
aaaccaagagctctggtcgatcttgctgcagctgtatcttctgcgctgctaataaatgaa
gcccaatggattggtatcatagtacgtccaattgcttactcacttaaaggcgccatcttg
cacattgatactggtccagggctaaagattgaggactcgtatggcattgagatggagagt
tacatggacacagattgtgatgctagtgcatcaaaatctgatgtttttgtagaagatagt
cctgtccctccgatacgggattcagaggtgcttaatctttgcgatggtaaaatagtgttt
tcagattgggcaagcaatgtgagttctattctatgggtccctgttcgtgcattgagtgag
aagcttgctagagggtcatcttcagtcaatccgctgaaacaagatattttagagggaatg
agaactgtagctttgaaacttgagtttggggttcatcataaccagatatttgagagaacc
atagctgcacatttcaccgacccatttgatgtgaccacaagggtggcaaacaaatgcaat
gatggtactttggtcttgcaggtcatgctacactccctagtcaaggcgaacttgatagtt
cttgatgcttggcttgatcttcaagatggatttgttcatggacaaaatgatggaagaccg
acttcaacgttttttccgcttgttgtgtctccaggatctagagcagcagtcgtgttcagt
ttatgcctagacaagactatgtcatcagaagggaaggatttgcaactaccagagagcatt
ctgaatatcaaatatggaatccatggagatagagcagctggggcacacaagccagtggat
gcagataactctggaactgatactgaagggagagatttggtgttcaagagtgctattgtt
ttgcaacgtccagtgcttgatccttgcctcacagttggattccttccactttcttctgat
gggcttagggtcgggaaacttatcacaatgcagtggagagtggaaaggcttaaagatctc
aaagaaagtgaagccgtagaacaagaacatgatgaggtgttgtatgaagtcaatgcaaat
tcggagaactggatgatcgctggtaggaagagaggccatgtctctctctcagaggagcaa
ggttcaagagtagtaatctcgatactgtgtgtcccgttagtagcgggttatgtccgtcct
cctcaactcgggttgccaaacgtagaagaagcaaatgtaagcagcaatccaccgggtcct
cacttggtatgcgtcttgcctccacttctaagttcttcctactgcatccctgtcaagtaa
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