Camelina sativa (false flax): 104725964
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Entry
104725964 CDS
T05044
Name
(RefSeq) branchpoint-bridging protein-like
KO
K13095
splicing factor 1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104725964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104725964
Spliceosome [BR:
csat03041
]
Complex A
Other components
Complex A specific factors
104725964
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
zf-CCHC
eIF3g
RRM_5
ProSAAS
PHD_4
KH_PNO1_2nd
RapA_C
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
104725964
NCBI-ProteinID:
XP_010443022
UniProt:
A0ABM0ULS6
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All DBs
Position
2:complement(15821044..15825275)
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AA seq
793 aa
AA seq
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MASVELNNSNSDSHTLEQPPPPPSNGDTAPLASDHLNPDSAPNPETNGSVAKPEFLRPLI
SENGVSKTLSGNDKDQSGGEEETTSRRKRRSRWDPPPSDSSNNASAEGGNDSGTGTRKRK
SRWADDEPKTQIQLPDFMKDFTGGIEFDPEIQALNSRLLEISRMLQSGMPLDDRPEGQRS
PSPEPVYDNMGIRINTREYRARERLNRERQEIIAQIIKKNPAFKPPADYRPPKLQKKLFI
PMKEFPGYNFIGLIIGPRGNTQKRMERETGAKIVIRGKGSVKEGRHQQKKDMKYDPSENE
DLHVLVEAETQDALEAAAGMVEKLLQPVDEVLNEHKRQQLRELATLNGTIRDEEFCRLCG
EPGHRQYACPSRTNTFKSDVLCKICGDGGHPTIDCPVKGTTGKKMDDEYQNFLAELGGTV
PESSLKQSATLALGPGSNPPWSNNAGNGASAHPGLGSTPTKPPSKEYDETNLYIGFLPPM
LEDDGLINLFSSFGEIVMAKVIKDRITGLSRGYGFVKYADVQMANTAVQSMNGYRFEGRT
LAVRIAGKSPPPTAPPGPPTPQAPTQGYPPPNQPPNAYPSQQYATGGQMPPPVGYATAPV
PWGPPVPSYSPYAPPPPPPGSYHPHMSPYGMQYPPPPPPHVTQAPPPGTTQNPSSSEPQQ
SFPPGVQADSSAATSSVPPNVYGSSVTTMPGQHPYMSYPSYYNAVPPPPPAPASSDHSQT
MGNMPWANNPPVSTPDHTQGLVNAPWTPNPPMPPTVGYSQNAPWALKPPVPPPAENPSSV
GDSEYEKFMAEMK
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtcgaattaaacaattccaattctgattcgcataccctagagcagcctcct
cctcctccctctaacggagacactgctccactcgcatcggatcatttgaatccggattct
gctcctaatccagagactaatggctcagtagcaaagcctgagttcttacgccctttgata
tcggagaacggtgttagcaagacgctgagtggtaacgataaggatcagtccggtggtgag
gaggagactacaagccggaggaagcgtcggagccggtgggatcctccgccttctgattca
agtaataacgctagtgctgaagggggtaatgattccggtactgggactaggaagcgtaag
tcaagatgggcagatgatgagccgaagacgcagattcagttgcctgatttcatgaaagat
ttcactggaggtattgagtttgatcctgagattcaggctttgaatagtaggttacttgag
attagtaggatgttgcagtctggtatgcctttggatgatagaccggaaggacagaggtct
ccttcaccagagcctgtgtatgataacatgggaatcaggattaacactagagagtataga
gcaagggagaggttgaatagagaaagacaagaaattattgctcagattatcaagaagaat
ccggcttttaagcctccggcagattatagaccacctaagctccagaagaagcttttcatt
ccgatgaaggagtttcctggttacaattttattggtctgattattggccccaggggtaat
acacagaagagaatggagagggagacaggtgctaaaattgtaattcggggtaaagggtct
gtgaaagaaggtagacatcagcaaaagaaggatatgaaatatgacccttcagaaaatgag
gacttgcatgttttagtcgaggctgagactcaggatgctcttgaagctgctgctggtatg
gttgagaagcttctgcaacctgttgacgaggtgctgaatgaacacaagaggcaacagctc
agggaacttgccacgttgaatgggacaataagggatgaagaattctgtagactgtgtggt
gagccaggacataggcagtatgcgtgtccttctcgtaccaatacctttaagagtgatgtt
ctttgcaagatctgtggtgatggtggacaccctactattgattgcccggtgaagggtact
actgggaagaaaatggatgatgagtatcagaacttcttggcagagttaggaggaactgtc
cctgaatcttctctcaaacagagtgctaccttggctcttggtcctggaagtaatcctcca
tggtctaacaatgcagggaatggtgcaagtgcgcatcctggcttagggtcgactccgacc
aaacctccctccaaagaatatgatgaaacaaatctgtacattgggtttttacctccgatg
cttgaggacgatggtttgattaatcttttttcatcgtttggtgaaattgtgatggcaaag
gtaatcaaggaccgtataactgggctgagcagaggctatggttttgtgaagtacgctgat
gtccagatggctaatactgctgttcagtcaatgaatggatatcggttcgaaggccgaaca
ctcgctgtcaggattgctggtaaatcgccaccgcctactgcacctccaggacctccaacc
cctcaagcaccaactcaaggttatcctcccccaaaccagcctcctaatgcctatccttct
caacagtatgcaactggtggtcaaatgccacctcctgtaggttatgcaacagctcccgtt
ccttggggtcctcctgttccctcctattctccttatgctcctccccctcctcctcctggt
tcataccatccacatatgtctccttatggaatgcaatacccaccaccaccacctcctcac
gtgacacaagcacctccacctggcactactcaaaacccatcttctagtgaaccccaacaa
agcttcccaccaggagtacaagctgacagtagtgctgctacctcgtctgtaccaccaaat
gtctatggtagctcagtcacgactatgcctggacagcatccatatatgagttatccgtct
tattacaatgctgttcctccacctcctccagcaccggcctcatctgatcattcccaaacc
atgggtaacatgccatgggccaacaatccgcctgtctcaacacctgaccacacacaagga
cttgtaaatgcaccttggacacctaatcctcctatgccgcccactgttggttattcacag
aacgcaccctgggctctgaaacctccagtaccgccacctgcagagaatccatccagtgtt
ggagattccgagtatgagaagttcatggctgaaatgaagtag
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