Camelina sativa (false flax): 104726020
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Entry
104726020 CDS
T05044
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 32-like
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104726020
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104726020
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
90S particles
Helicases
104726020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
KR
Motif
Other DBs
NCBI-GeneID:
104726020
NCBI-ProteinID:
XP_010443073
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All DBs
Position
11:complement(42568506..42571839)
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AA seq
745 aa
AA seq
DB search
MGRPKKTRGMKKEMRRNEVEEINLLNQWIESQKPDSGSNPLSFGPLPKDAKIGKFEDGKN
GTVFSRYAGVRKFTQLPISDKTKRGLKEAKYADMTDVQRAAIPHALCGRDILGAARTGSG
KTLAFVIPILEKLHRERWSSEDGVGCIIISPTRELAAQTFNVLNKVGKFHNFSAGLLIGG
REGVDVEKEKVNEINILVCAPGRLLQHMDETPNFDCSQLQILILDEADRVLDSAFKGQLD
PIISQLPKHRQTLLFSATQTKKVKDLARLSLRDPEYISVHEEAVTATPTSLMQTVMIVPV
EKKLDMLWSFIKTHLNSRILVFLSTKKQVKFVYEAFSKLQPGIPLKCLHGKMSQEKRMGV
YSEFIVRQSVLFCTDVLARGLDFEKAVDWVVQMDCPEDVASYIHRVGRTARFYTQGKSLL
FLTPSEEKMIERLQEARVPVKLIKANNEKLQEVSRRLAALLVKHPELQGVAQRAFITYLR
SIHKRKDKEIFDVSKLSIENFSASLGLPMTPKIRFTNLKTKKKGVFESSIAMEEPEYAQE
CEAPPVVEKDLLGDYLDEEDFALKPHGEGKEVEKSTKEEVLMPGTRVLKNKKLKINLHRP
FGSRVVLDEEGNSLAPLASVAGATGTDMALDEEKRKEFYKKVGAEMRKADAEDKKVEREK
RREKRMKQKIKRKRGAMEEDEEDDEEEEEEGHDGSGSSEEETGRNHKRAKKIVSDNEEKE
GGKINTDSISVAELEEIALKLITQS
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgggaagacctaagaagaccaggggaatgaagaaggagatgcgtcgcaatgaagtcgag
gagatcaatcttctgaaccagtggatcgaatcccagaaacctgattcaggatccaatcca
ctttcatttggtcctcttcctaaagacgccaagatcggaaagttcgaagacggcaaaaac
ggcaccgtattctcgcgttacgcaggcgtaaggaagtttactcagttgccgatatcggat
aaaacgaaaagagggttgaaagaggcgaagtacgctgatatgactgatgtacagagagct
gccatacctcatgctttatgcggaagagatattctcggtgctgcgcgaactgggtcgggc
aaaactttggcttttgttattccgatcttggagaagttacatagggagagatggagttct
gaagatggagttggatgtattattatatctccaacaagggaattggcagctcaaactttc
aatgttttgaataaagtaggaaagtttcataacttcagtgcggggctcttaattggtggg
cgcgaaggagttgacgttgagaaggagaaagttaatgagattaatattttggtatgtgct
cctggtaggcttcttcagcatatggatgagaccccaaacttcgattgttcacagcttcag
attctgattttagatgaggccgaccgtgtccttgattctgcgtttaaggggcagttggat
cctataatctcacagttgcctaagcacaggcaaactttgcttttctctgcaacccaaact
aagaaagtcaaggatctagctagactcagtttgagagatcctgagtacattagtgtacat
gaagaggcggttacagctactccaactagcttgatgcagacggtcatgattgtcccagtg
gaaaagaaattagacatgttatggagcttcatcaaaactcatcttaattccaggattctt
gtttttctctccaccaagaaacaggtcaaatttgtttatgaagcattcagcaagctccag
cctggaatacctttgaagtgccttcatggaaaaatgagtcaggagaaaaggatgggagtg
tactcggagttcattgtgagacagtcagttctgttttgtactgatgttcttgctagagga
cttgattttgagaaggctgtggactgggttgttcagatggattgtcctgaagatgtagct
tcttatattcaccgagttgggcgtacagctcgtttctatactcaagggaagtcgctcctc
tttctgacaccttcggaagaaaaaatgattgagagattacaagaagctagagtgcctgta
aaactcatcaaggcaaacaacgaaaagttgcaagaggtttctaggcggttggctgcttta
ttagtcaagcaccccgaacttcaaggtgttgctcagagagccttcatcacatatctgagg
tccatccacaaaagaaaagataaagagatttttgatgtgtcgaagctgtcgattgaaaac
ttttctgcttcacttggtctgccaatgactcccaaaatccgattcacaaacctaaaaacg
aagaaaaagggggtctttgagagttctatcgctatggaggagcctgagtatgcacaagaa
tgtgaagcacctccggttgtagaaaaagatcttctgggtgattatttagatgaagaggat
ttcgctctcaagccacatggagagggcaaggaagtagaaaaatcaaccaaggaagaagtt
ctcatgccaggaactcgggttttgaaaaacaagaagctgaagatcaatctacacagacca
tttgggtcaagggttgtgcttgatgaggaaggcaattcgttggctcccttagcaagtgta
gctggtgcaacagggactgacatggcccttgatgaagagaaaaggaaggaattctataag
aaagtgggagcggaaatgaggaaagccgacgctgaggacaagaaagttgagagggaaaag
aggagggaaaagagaatgaaacagaagattaagaggaagagaggagccatggaggaggat
gaagaagatgacgaagaagaagaagaagaaggccatgatggttctggatcatcagaagaa
gaaacaggaagaaatcacaaaagagccaagaaaatcgtctctgacaatgaagaaaaggaa
ggaggaaaaatcaacacagattctatctccgtagctgagcttgaagaaatagcactcaaa
ctgataactcaatcatga
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