Camelina sativa (false flax): 104726102
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Entry
104726102 CDS
T05044
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104726102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104726102
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104726102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
SET1_RBD
Motif
Other DBs
NCBI-GeneID:
104726102
NCBI-ProteinID:
XP_010443192
LinkDB
All DBs
Position
11:complement(42961225..42963661)
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AA seq
457 aa
AA seq
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MESDLGKLFVGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFSDPCVA
ERVIMVDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGGARTKKIFVGGL
PSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLLKTFHELNG
KLVEVKRAVPKEISPPASSSNRSPLPLGVNYGGGVSNRMSANSYFNNFAPGPGFYNNLGG
SVVGGRFSPVIGSGRNAASAFGLGLNHELSLNLNPSYDGTTSTFGYNRLPSNPYFNGASP
NRYTSPIGHNRTDSPYNSNNRGLWGNRTDTAGPGWNLNENNRGNWGLPSSSSAVANDNSG
GYGRNFGTGSGLSSSPFNGFEGSIGELYRGSSVYSDSTWQQQQQQLPSQSSHELDNLSRP
YGYDIDNVGSDPSANDSEGYNGSHDVGNRQTNRGIEA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggaatcggatctggggaagctcttcgttggtgggatttcgtgggatacagatgaagaa
aggttaagagactattttagcaactacggtgatgttgttgaagctgtgatcatgagagac
cgtgccactggtcgtgctcgtggctttggtttcattgttttctctgatccttgtgttgct
gagagagtcatcatggtcgacaaacacatcatcgatggccgcacggttgaggcgaagaag
gccgtgcctcgagatgatcagcaggtgctaaaacgacacgctagtcctatccaccttatg
tcacctgtccatggtggtggcggtggtgcaaggacaaagaagatctttgttggaggttta
ccgtccagcattaccgaggaagagttcaagaactactttgatcagtttggtactattgct
gatgttgtggtaatgtatgatcataacacgcagaggcccagagggtttggtttcattact
tttgattcagatgatgctgttgacagagttcttctcaagacctttcatgagctcaatgga
aaactagttgaggtcaaaagagcggtacctaaggagatttcccctcctgcttcttctagt
aaccgaagcccgcttcctctcggtgttaactatggtggaggcgtgtctaataggatgtct
gctaatagctactttaacaactttgctcctggtcctggtttttataacaatctaggaggc
tctgttgttggtggtcgctttagtcctgttattggtagtggtagaaatgcggcttctgct
ttcggcctcggtttgaatcatgaactgagtttgaatttgaatcctagctatgatgggact
acttctacatttgggtataaccggcttccaagcaacccttacttcaacggtgcttcccca
aaccgttacacctctccaatcgggcacaatagaactgattctccttacaattctaacaat
agaggcttatggggaaacagaaccgatactgcaggtcccggttggaacttgaatgaaaac
aacagaggaaactggggacttccttcttcttcttctgctgttgctaatgataacagtggc
ggctatggaagaaactttgggacaggttctggactttcctcgtccccatttaacggtttt
gaaggttctataggggaattgtacagagggagctcggtttacagcgactcaacgtggcag
caacagcagcagcagctaccatctcagtcttctcacgagctagacaatttgtctcgccct
tacggctatgacattgacaatgtaggttcagacccatctgcaaatgactcagaaggatac
aatggaagccacgatgttggaaatagacaaactaatagaggtattgaggcatag
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