Camelina sativa (false flax): 104726373
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Entry
104726373 CDS
T05044
Name
(RefSeq) VAMP-like protein YKT61 isoform X1
KO
K08516
synaptobrevin homolog YKT6
Organism
csat
Camelina sativa (false flax)
Pathway
csat04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
104726373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104726373
Membrane trafficking [BR:
csat04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
104726373
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Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Longin
AcrIIA4
DUF6891
Herpes_teg_N
Motif
Other DBs
NCBI-GeneID:
104726373
NCBI-ProteinID:
XP_010443518
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All DBs
Position
11:44627344..44629480
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AA seq
200 aa
AA seq
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MKITALLVFKCAPVSTEPVILANASDVSHFGFFQRSSVKEFVVFVGRTVASRTPPSQRQS
VQHEEYKVHAYNRNGLCAVGFMDDHYPVRSAFSLLSQVLDEYQKSFGETWRSAKEEDPTQ
TWPYLVEALNKFQDPAEADKLLKIQRELDETKIILHKTIDSVLERGEKLDSLVEKSSDLS
MASQMFYKQAKKTNSCCTIL
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaccgccttgctcgttttcaagtgcgctcctgtatctaccgaacccgtcatc
ctcgccaacgcttctgacgtctctcacttcggttttttccagcgatctagcgtcaaggag
tttgtcgtctttgtcggtcgcactgttgctagccgtacccctccttctcagcgccagtcc
gtccagcacgaagagtacaaggttcacgcttacaataggaatggactttgcgctgtgggg
ttcatggacgatcattatcctgttcgaagtgctttttctcttctcagccaggttcttgat
gagtaccagaagagttttggtgagacatggaggtctgcaaaagaagaagaccccactcag
acttggccatatttagtcgaagctttaaacaaatttcaggatccagcagaggctgataag
ctgttgaaaattcagagggagttggatgagaccaagattatccttcataaaaccattgat
agtgttctagaacgtggtgagaagctggacagcctagtggagaagagctcagatttgagc
atggcatcgcagatgttttacaagcaagcgaagaaaacaaattcatgctgtactatcctg
tga
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