Camelina sativa (false flax): 104726419
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Entry
104726419 CDS
T05044
Name
(RefSeq) transcription initiation factor TFIID subunit 15b-like
KO
K13098
RNA-binding protein FUS
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104726419
09122 Translation
03015 mRNA surveillance pathway
104726419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104726419
Spliceosome [BR:
csat03041
]
Complex A
Other components
Complex A specific factors
104726419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
104726419
NCBI-ProteinID:
XP_010443584
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All DBs
Position
11:complement(44794782..44797893)
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AA seq
427 aa
AA seq
DB search
MAGMYNQDGGGGAPIPSYGGDGYGGGGGYGGGDAGYGARSSSGGGGYGGGGRGGYGGGGG
RGNRGGGGGGYQGGVGGGRGGGGRDGGGRDGDWRCPNPSCGNVNFARRVECNKCGAPAPS
GTGSGAGDRGSGGYSRGGGASDRGGGRGGRNDSGRSYESSRYDGGSRSGGSYGSVSQQRD
NGSYGQAPPPLAAIPSYDGSGSYPPPSGYGMEAVPPPSSYSGGPPSYGGPRGGYNSDAPS
PGGRGGGYDGGSAPRRQESSYVEAPSENRTQVKQCDADCDDTCDNARIYISNLPPGVTTD
ELKDLFGGIGQVGRIKQKRGYKDQWPYNIKIYTDEKGNFKGDACLAYEDPSAAHSAGGFF
NNYEMRGSKISVTMAEKSAPRPPTFDQRGGGRGGGGGYGGGGGDRRRDNYGSGPERNHHG
GNRSRPY
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgggatgtacaatcaagacggcggcggaggtgcgcctatcccgtcgtacggtggt
gatggatacggcggaggcggaggttatggaggcggtgatgctggatacggagcacgcagt
tcctctggcggaggtggttacggtggcggcggacgcggtggttacggtggcggcggcggt
agaggaaatcgaggtggtggcggtggtggatatcaaggaggagtcggcggcggaagaggt
ggtggtggcagggatggtggcggcagagatggagattggcgttgccctaaccctagttgt
gggaacgtgaactttgcaaggagagttgaatgtaacaagtgtggtgcacctgctccttct
ggtactggttctggtgctggtgatcgtggaagtggtggatatagccgaggtggaggtgct
agtgatcgtggcggtggccgtggaggtagaaacgatagtggtaggagctatgagagtagt
agatatgatggtggaagtaggagtggtggtagctatggtagtgttagtcaacagagggat
aatggttcgtatggtcaggctcctcctcctcttgcagctattccatcctatgatggttct
ggaagttatcctccaccctcggggtatggaatggaagcagttcccccgccttcaagctat
tctggtggccccccttcttatggtggtccaagagggggttataacagtgatgcaccgagc
cctggtggtcggggaggtggctatgatggtggtagtgctcctcgacggcaggaatctagt
tatgtagaagcaccttctgaaaatcgcacccaagtcaagcagtgcgatgcggattgtgat
gatacttgtgataatgctagaatatacatctctaatttacctccgggtgtgacaactgat
gaactcaaggatctctttggtggcattggccaagttggaagaattaagcagaagcggggt
tataaagatcagtggccctataatatcaagatttacactgatgagaagggtaactttaaa
ggtgacgcctgtctggcttatgaagatcctagtgctgcacactccgctggcggctttttc
aacaattacgaaatgagagggagcaagattagtgtaacgatggcagagaagtctgcgccc
cgtcctcctacctttgaccagagaggcggtggtagaggaggagggggtggctatggtggt
ggtgggggagacagaagaagagataactatgggtcagggccagaaagaaaccaccatggg
ggaaaccggtctcgtccatattga
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