KEGG   Camelina sativa (false flax): 104726455
Entry
104726455         CDS       T05044                                 
Name
(RefSeq) protein DAMAGED DNA-BINDING 2
  KO
K10140  DNA damage-binding protein 2
Organism
csat  Camelina sativa (false flax)
Pathway
csat03420  Nucleotide excision repair
csat04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104726455
  09124 Replication and repair
   03420 Nucleotide excision repair
    104726455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csat04121]
    104726455
   03400 DNA repair and recombination proteins [BR:csat03400]
    104726455
Ubiquitin system [BR:csat04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     104726455
DNA repair and recombination proteins [BR:csat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      104726455
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EIPR1 Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_EML_2 WDR55 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st WD_LRWD1 WD40_RFWD3 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st AmyB_C DUF4394
Other DBs
NCBI-GeneID: 104726455
NCBI-ProteinID: XP_010443626
LinkDB
Position
11:complement(44947881..44951096)
AA seq 564 aa
MGITRNRRKTDPEIIIARDTDSELSSSEEEEEDKYPLSESEEEEEEEEEDEAVKNGGKIE
LEKNKAKGKAPITVKLIKKVCKVCKQPGHEAGFKGATYVDCPMKPCFLCKMPGHTTMSCP
HRVVTDHGILPTSHRNTTNPIDFVFRRQLQPRIPPIKPKYVIPDQVHCAVIRYHSRRVTC
LEFHPTRNNILLSGDKKGQIGVWDYAKVYEKNVYGNIHFVQVNNMRFSPTNDDMVYSASS
DGTIGYTDLETGISSTLLNLNPDGWQGQKSWKMLYGMDINPEKGLVLAADNFGFLHMIDH
RTNNSTGEPILIHKQGSKVVGLDCNPVQPELLLSCGNDHFARIWDMRKLQPKASLNDLAH
KRVVNSAYFSPSSGTKILTTCQDNRIRIWDSIFGNLDLPSREIVHSHDFNRHLTPFKAEW
DPKDTSESLIVIGRYISENFNGTALHPIDFIDASNGQLVAEVMDPNITTITPVNKLHPRD
DVLASGSSRSLFIWRPQEETEMVEEKKDKKIIICSSESKKKGKKHKRGSDDEDDDDDMFS
SKSKNIKVNKSQAKTTKSTRKTKT
NT seq 1695 nt   +upstreamnt  +downstreamnt
atgggtataacgaggaacagaaggaaaacggaccctgaaatcatcatcgccagagataca
gattccgaattaagttcgtcagaagaggaagaagaagataagtaccctttgtcggagtcg
gaggaggaagaagaagaagaagaagaagatgaagcggttaaaaatggagggaaaattgaa
ttggagaagaacaaagccaaagggaaagcacccattaccgttaagcttatcaaaaaagtt
tgcaaagtttgtaagcagcctgggcatgaagctggatttaaaggagcaacctatgtcgat
tgtcctatgaaaccttgcttcttatgcaaaatgcctggccacactacaatgtcatgtcct
catagagtggttactgaccacggaatactcccaacttcgcataggaatacgacgaaccct
attgactttgtgttcaggcgccaactccaaccgaggattccccctatcaaaccaaaatat
gtgataccggatcaagttcattgtgcagtcattcgataccacagcagacgtgttacatgt
ttggagttccatccaacaagaaataacattcttctctctggagataagaaagggcaaatt
ggagtctgggattatgctaaagtgtatgagaagaatgtgtatggaaacatacacttcgta
caagttaataatatgcggtttagtcccacaaatgacgacatggtgtattctgcatcctct
gatggaacaattggttatactgacctggaaactggaatctcatcaacgttgctgaatctc
aaccccgatggatggcagggccaaaagagttggaaaatgctgtacggtatggatattaac
ccagagaaaggtttggtgctagctgctgataattttgggtttcttcacatgatcgaccat
cgtaccaataacagtacgggtgagccaattctgatacacaagcaaggaagcaaagttgtt
ggactcgactgcaaccctgtccagcctgagcttcttctcagttgtgggaacgatcatttt
gcacggatatgggatatgcgtaaacttcaacctaaagcttctctgaatgatcttgcacac
aagcgagtagtcaactctgcttatttctctccatcatcaggcacaaaaatcctcacgacc
tgtcaggacaaccgtattcgaatatgggactcgatctttgggaacttggatttgccaagc
cgagagattgttcatagccatgattttaatcggcatttgacgccattcaaagctgaatgg
gatcctaaggatacctcggagtcgctcattgtgattggccgttacataagtgaaaacttc
aacggaactgctcttcacccaatagatttcattgatgcaagcaatggacagttggttgca
gaggttatggatccaaacataacaactattactccagtcaacaagttgcatccgcgtgat
gatgttttagcctcaggaagttcaaggtccctattcatttggcggccacaggaggaaaca
gagatggttgaggagaagaaggataagaagattattatatgttctagtgaaagcaagaag
aaaggaaagaagcacaagcgtggcagcgatgatgaagacgacgatgatgacatgtttagc
tctaaaagcaaaaacattaaagtcaacaagtctcaagcaaaaacaaccaagtctactcgg
aagacaaaaacttaa

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