Camelina sativa (false flax): 104726455
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Entry
104726455 CDS
T05044
Name
(RefSeq) protein DAMAGED DNA-BINDING 2
KO
K10140
DNA damage-binding protein 2
Organism
csat
Camelina sativa (false flax)
Pathway
csat03420
Nucleotide excision repair
csat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104726455
09124 Replication and repair
03420 Nucleotide excision repair
104726455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104726455
03400 DNA repair and recombination proteins [BR:
csat03400
]
104726455
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104726455
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
104726455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WD_LRWD1
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
AmyB_C
DUF4394
Motif
Other DBs
NCBI-GeneID:
104726455
NCBI-ProteinID:
XP_010443626
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Position
11:complement(44947881..44951096)
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AA seq
564 aa
AA seq
DB search
MGITRNRRKTDPEIIIARDTDSELSSSEEEEEDKYPLSESEEEEEEEEEDEAVKNGGKIE
LEKNKAKGKAPITVKLIKKVCKVCKQPGHEAGFKGATYVDCPMKPCFLCKMPGHTTMSCP
HRVVTDHGILPTSHRNTTNPIDFVFRRQLQPRIPPIKPKYVIPDQVHCAVIRYHSRRVTC
LEFHPTRNNILLSGDKKGQIGVWDYAKVYEKNVYGNIHFVQVNNMRFSPTNDDMVYSASS
DGTIGYTDLETGISSTLLNLNPDGWQGQKSWKMLYGMDINPEKGLVLAADNFGFLHMIDH
RTNNSTGEPILIHKQGSKVVGLDCNPVQPELLLSCGNDHFARIWDMRKLQPKASLNDLAH
KRVVNSAYFSPSSGTKILTTCQDNRIRIWDSIFGNLDLPSREIVHSHDFNRHLTPFKAEW
DPKDTSESLIVIGRYISENFNGTALHPIDFIDASNGQLVAEVMDPNITTITPVNKLHPRD
DVLASGSSRSLFIWRPQEETEMVEEKKDKKIIICSSESKKKGKKHKRGSDDEDDDDDMFS
SKSKNIKVNKSQAKTTKSTRKTKT
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgggtataacgaggaacagaaggaaaacggaccctgaaatcatcatcgccagagataca
gattccgaattaagttcgtcagaagaggaagaagaagataagtaccctttgtcggagtcg
gaggaggaagaagaagaagaagaagaagatgaagcggttaaaaatggagggaaaattgaa
ttggagaagaacaaagccaaagggaaagcacccattaccgttaagcttatcaaaaaagtt
tgcaaagtttgtaagcagcctgggcatgaagctggatttaaaggagcaacctatgtcgat
tgtcctatgaaaccttgcttcttatgcaaaatgcctggccacactacaatgtcatgtcct
catagagtggttactgaccacggaatactcccaacttcgcataggaatacgacgaaccct
attgactttgtgttcaggcgccaactccaaccgaggattccccctatcaaaccaaaatat
gtgataccggatcaagttcattgtgcagtcattcgataccacagcagacgtgttacatgt
ttggagttccatccaacaagaaataacattcttctctctggagataagaaagggcaaatt
ggagtctgggattatgctaaagtgtatgagaagaatgtgtatggaaacatacacttcgta
caagttaataatatgcggtttagtcccacaaatgacgacatggtgtattctgcatcctct
gatggaacaattggttatactgacctggaaactggaatctcatcaacgttgctgaatctc
aaccccgatggatggcagggccaaaagagttggaaaatgctgtacggtatggatattaac
ccagagaaaggtttggtgctagctgctgataattttgggtttcttcacatgatcgaccat
cgtaccaataacagtacgggtgagccaattctgatacacaagcaaggaagcaaagttgtt
ggactcgactgcaaccctgtccagcctgagcttcttctcagttgtgggaacgatcatttt
gcacggatatgggatatgcgtaaacttcaacctaaagcttctctgaatgatcttgcacac
aagcgagtagtcaactctgcttatttctctccatcatcaggcacaaaaatcctcacgacc
tgtcaggacaaccgtattcgaatatgggactcgatctttgggaacttggatttgccaagc
cgagagattgttcatagccatgattttaatcggcatttgacgccattcaaagctgaatgg
gatcctaaggatacctcggagtcgctcattgtgattggccgttacataagtgaaaacttc
aacggaactgctcttcacccaatagatttcattgatgcaagcaatggacagttggttgca
gaggttatggatccaaacataacaactattactccagtcaacaagttgcatccgcgtgat
gatgttttagcctcaggaagttcaaggtccctattcatttggcggccacaggaggaaaca
gagatggttgaggagaagaaggataagaagattattatatgttctagtgaaagcaagaag
aaaggaaagaagcacaagcgtggcagcgatgatgaagacgacgatgatgacatgtttagc
tctaaaagcaaaaacattaaagtcaacaagtctcaagcaaaaacaaccaagtctactcgg
aagacaaaaacttaa
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