Camelina sativa (false flax): 104726701
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Entry
104726701 CDS
T05044
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104726701
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104726701
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
104726701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_22
AAA_30
T2SSE
DEXQc_Suv3
AAA_19
UvrD-helicase
Helicase_PWI
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
104726701
NCBI-ProteinID:
XP_010443930
LinkDB
All DBs
Position
11:46179114..46193322
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AA seq
2083 aa
AA seq
DB search
MLVQIPRLTSSLREPFDIDQAYLRRKTILQTLNKPRSSGNRLDESDLARRIVHQWEGASP
EVRQAYKQFTGAVVELIDREVPSDEFREVAFAAYRLFGKPVEEDSDIDDNNSIAEKKLEL
QNLVGHAASDANVKNVASLARALYSIQPTHQSEAYTNEVDGGAEFGADLVFNLPARFLVE
AFDEKGFQDVESNDTRASFSEGWSDVSNTSKNLSAGKFDLSWLRDACGQMVRETNSQLSR
EELAMAICRFLDSDKPGEEIAGDLLDLVGDSAFETVQDLIMHRKEIVDAIHHGQMVLKSD
KTASNAQSRMPTYGTQVTVQTESAKQIEKLRRKEEKKNKRNAELGLESELSEANFSSLLE
ASEKKTAFEDLIGSGEANSLALALPQGTVRKHLKGYEEVFIPPTPTAQMKPGEKLIEIKE
LDDFAQAAFHGYKSLNRIQSRIFQTVYHTNENILVCAPTGAGKTNIAMISVLHEIKQHFR
DGYLHKNEFKIVYVAPMKALAAEVTSAFSRRLAPLNMVVKELTGDMQLTKTELEETQMIV
TTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGAVIEALVARTLRQVESTQTMIR
IVGLSATLPSYLQVAQFLRVNPDTGLFYFDSSYRPVPLAQQYIGITEHNFAARNVLLNEI
CYKKVVDSIKQGHQAMIFVHSRKDTSKTAEKLVDLARQYENLDLFVNETHPQFQLMKKDV
MKSRNKDVVKFFEAGFGIHHAGMLRSDRTLTERLFSDGLLKVLVCTATLAWGVNLPAHTV
VIKGTQLYDAKAGGWKDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYLRLLTSQ
LPIESQFISSLKDNLNAEVVLGTVTNVKEACAWLGYTYLSIRMKLNPLAYGVGWDEIIAD
PSLSLKQRALVADAARSLDKAKMMRFDEKSGNFYCTELGRVASHFYIQYSSVETYNEMLK
RHMNESEIIDMVAHSSEFDNIVVREEEQNELETLARSCCPLEVKGGPSNKHGKISILIQL
YISRGSIDAFSLVSDASYISASLARIMRALFEICLRKGWCEMTLFMLEYCKAVDRQLWPH
QHPLRQFDRDLPFDTLRKLEERGADLDRLYEMEEKDIGALIRYNPGGRLVKQHLGYFPSI
QLEATVSPITRTVLKVDLLITPDFIWKDRFHGAALRWWILIEDTENDYIYHSDLFTLTKR
MARGEPQKLSFTVPIFEPHPPQYYVHAVSDSWLHAESFFTISFHNLTLPEARTSHTELLD
LKPLPVTSLGNRLYESLYKFSHFNPIQTQIFHVLYHTDNNVLVGAPTGSGKTISAELAML
RLFSTQPDMKVVYIAPLKAIVRERMNDWKKHLVAPLGKEMVEMTGDYTPDLVALLSADII
ISTPEKWDGISRNWHTRSYVKKVGLVILDEIHLLGADRGPILEVIVSRMRYISSQTERSV
RFVGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPIEVHIQGYPGKYYCPRMNSMNKP
AYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPRQFLSVSEEDLQMVLSQIT
DQNLRHTLQFGIGLHHAGLNDHDRSAVEELFTNNKIQVLVSTSTLAWGVNLPAHLVIIKG
TEYFDGKTKRYVDFPLTEILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFLYEPFPVE
SSLKEKLHDHFNAEIVSGTIGNKEDAVHYLTWTYLFRRLMANPAYYGLEGTQDETVCSYL
SRLVQNTFDDLEDSGCLKVNENSVEPMMLGTIASQYYLCYMTVSMFGSNIGSDTSLEAFL
HILAGASEYDELPVRHNEENYNKTLSDKVRYPVDNNHLDDPHVKANLLFQAHFSQLALPI
SDYNTDLKSVLDQSIRILQAMIDICANSGWLSSSLTCMRLLQIVMQGMWSDQDSSLWMIP
CMNDDLLGSLTARGIHTLHQLLEIPKETLQSVTGNFPASRLSQDLQRFPRIRMNVRLQKK
DSDGKKMPSMLEIRIEKISKRNSSRALAPRFPKVKDEAWWLVLGDTSTSELFAVKRVSFT
GRLTTRMELPPNVTSFQNTKLILVSDCYLGFEQEHSIEQPARR
NT seq
6252 nt
NT seq
+upstream
nt +downstream
nt
atgttggttcagattcctcgcttgacaagctctctcagagagccattcgatatcgatcag
gcttaccttcgccgcaaaactatactccaaactcttaataagcctcgcagctctgggaat
cgtcttgatgaatctgaccttgctaggaggatagttcatcaatgggaaggagcttctcca
gaagtgcgacaagcatacaagcagtttactggagctgtagtggagttgattgatcgggaa
gttccatctgatgagtttcgtgaggttgcttttgctgcttatcgtctgtttggcaagcca
gtggaggaggacagtgatatcgatgataataatagcattgccgaaaagaagctagagttg
caaaatcttgttggtcatgctgcctcagatgctaatgttaaaaacgtggcctccttagct
cgggcactttactcaatacaacctacgcatcaatctgaggcatacactaacgaagttgat
gggggagctgagtttggtgccgaccttgttttcaatctaccagctcgttttctggtggaa
gcttttgatgaaaaaggatttcaggatgtggaaagcaatgacactcgtgcatcattttct
gaaggatggagtgatgtcagcaacacgtcaaagaatctaagtgcaggaaaattcgattta
agttggctaagagatgcatgtggacaaatggttagagaaaccaattcacaactttcccgt
gaagaactggctatggctatatgcaggtttctggattccgataaacctggtgaggagata
gctggggatctgctggatcttgttggggatagcgcatttgaaactgttcaagaccttatt
atgcatcggaaagagattgttgatgctattcatcatggtcaaatggttctcaaatctgac
aaaacagcttcaaacgcccaatctcggatgccaacctatggcacacaggttactgtccaa
acagagtctgcaaagcaaattgaaaaacttcggcgtaaagaggaaaagaaaaacaaacga
aatgctgagcttggtttagagagtgaactatcagaggccaatttttcttctttacttgag
gcaagtgaaaagaagactgcatttgaggatttgatcggttctggagaagcgaattctctt
gcattggcccttcctcaaggtactgtaaggaagcacttaaaaggatatgaggaagtcttt
atcccgccaacccctactgcacaaatgaaacctggcgagaagctgattgagataaaagag
ttagatgacttcgctcaagctgcttttcatggttacaagtccttaaaccgtattcagagt
cgcatatttcagacagtttaccacaccaatgagaatatattggtctgtgctccaacagga
gctggtaaaacgaatatagctatgatttctgttctacatgagatcaaacaacacttcagg
gatggctacttgcacaaaaacgagtttaagattgtttatgtagctcctatgaaggcttta
gcggcagaggtcacgtcagcatttagccgtcgtctggctccattaaatatggttgtgaag
gagcttacaggggatatgcaactcacgaagactgaacttgaagagactcagatgatagtg
acaacaccagagaaatgggatgtcattactcgcaaaagcagtgacatgtcattgtcaatg
ctagtaaaactattgatcattgatgaagtgcatcttctgaatgatgacagaggtgcagtg
atagaggccctagttgctcggacccttcgtcaggtggagtcaacacagacaatgataaga
attgtaggcctgtcagccactttacctagctacctacaggttgctcagtttctacgagtg
aatccagacacgggcctcttctattttgattcgagttatcgcccagttcccttagctcaa
cagtacataggcatcactgagcataactttgctgctagaaacgtattgttaaatgagata
tgctacaaaaaggttgttgattcaattaaacaaggtcatcaagcgatgatttttgttcat
tcccgaaaagacacttcaaaaacagctgagaaactggttgatcttgcccggcaatatgaa
aatctggatttgttcgttaatgagactcatcctcaatttcaactgatgaagaaagacgtt
atgaagtccagaaataaggatgttgtcaaattctttgaagctggcttcggaattcatcat
gcggggatgttgcgatctgatagaacacttacggagaggctgttttctgatggtctctta
aaggtgcttgtttgcactgcaactcttgcgtggggtgttaatctgcctgcacacacagtc
gtaattaagggaactcaattgtatgatgccaaggctggtgggtggaaagacttgggaatg
cttgatgtcatgcagatctttggaagggctgggagaccacagtttgataagagtggtgag
ggaattatcatcacatcccatgacaagctagcatactatctccggctgctgacgagtcag
cttcccatagaaagtcagttcataagctccttgaaagataatttaaacgcagaagtggta
ttgggaactgtgactaatgtaaaggaagcctgtgcttggcttggatatacatatttgtca
attcggatgaagttaaatcctttggcttatggcgttggatgggacgagataattgccgat
ccttctttatcgttgaagcaacgagcccttgtggctgatgctgcacgttcactggacaaa
gctaagatgatgaggttcgacgagaaaagcggaaatttttactgtaccgagcttggacgg
gttgcaagtcacttctatattcaatattctagtgttgaaacatacaacgaaatgttgaag
cggcacatgaatgaaagcgagataattgatatggttgcccattcttctgaatttgacaat
attgtggtaagagaggaagagcagaatgaacttgagactcttgcacgctcctgctgtcct
ttagaagttaagggaggaccttctaacaaacatggaaaaatctcaattcttattcagttg
tacatatcccgtggatcaattgatgccttttctctggtctctgatgcttcatacattagt
gctagtttagcacgtataatgcgtgctctgtttgagatatgcttgcgcaaaggatggtgt
gagatgactttatttatgttggaatactgcaaggcagttgatcgtcaactatggccccat
caacatcctcttcggcaattcgatagggacctaccttttgatacattaagaaaacttgaa
gagcgaggggctgacttagaccgtctgtatgagatggaggaaaaagacattggagcgttg
attcgttacaatcctgggggaaggttggtcaagcagcatctaggatattttccttcaatt
cagttggaagctactgttagtccaattacacgcactgtattgaaggtggatttgcttata
actccagatttcatatggaaggatcgttttcatggtgctgctcttcgttggtggattctc
attgaggacacagagaatgattatatctaccactcagatcttttcacactaacgaagcgg
atggctagaggggaaccgcagaagctttcttttactgtgccgatatttgaaccacatcca
cctcaatactatgttcatgcggtttctgattcttggttgcatgcagaatctttcttcaca
atctctttccacaatcttacactaccagaggcacgaacgtctcacacagagcttttagac
ttaaaacctctccctgtgacttctcttgggaatagattgtatgaatcgctttacaaattt
tcgcattttaatccaatacagactcagatttttcatgtgttatatcacacagacaacaat
gttcttgtaggagctccaactggaagtgggaaaactatatctgctgaacttgcaatgttg
cgtctcttcagtacccagcctgatatgaaggttgtttacatagcaccactgaaggctatt
gttcgagaaaggatgaatgattggaaaaagcatcttgttgctccacttggaaaagaaatg
gtcgaaatgactggagattacactccagatttagtagctctcttgtccgcagatatcatc
atatctacccctgaaaaatgggatggcattagtcgtaattggcatactcgaagttatgtc
aaaaaggtcggccttgttattttggatgagattcacttgcttggagccgacagaggaccc
atacttgaggttattgtgtctaggatgagatatatatcatcacagacagagcgctccgtc
cggtttgttggtctttcgacagctctggcaaatgcaggtgatttggctgactggttgggt
gtcggggagatcggacttttcaattttaaaccaagcgtcaggcctgtaccaattgaagtt
catattcagggttatcctggaaagtactactgcccaaggatgaatagcatgaacaagcca
gcatatgcagccatatgtacccattcacctacaaaacctgttcttatctttgtttcatct
cgtagacagacaaggcttaccgcactggatctaattcagtttgctgcctctgacgaacat
ccccggcaatttctgagtgtgtcagaggaagacttgcagatggtcctctcacagataact
gaccagaaccttcgacatacattgcaattcggcatcggattgcatcatgcaggtttaaac
gaccacgatagatctgcagtagaagagcttttcacgaacaacaagattcaggttttggtc
tcaacaagtaccttggcatggggagtgaacctaccagctcatttagttattataaaggga
acggaatattttgacgggaaaaccaaaagatatgttgacttccctcttacagagatcttg
caaatgatgggacgtgcagggcgtccgcaatttgaccaacatgggaaagcggtcattctt
gtacatgaacctaaaaaaagcttttacaaaaagttcttgtacgaaccattccccgtagaa
agtagcttgaaagagaagctgcacgatcacttcaatgcagaaatagtatctggaacaata
ggcaacaaagaagatgcagtgcattatcttacatggacatatctgttccgtagactgatg
gctaatcctgcttactatgggctagaaggtactcaagacgaaacagtctgttcctactta
tcaagattggtgcaaaacacatttgatgatcttgaagacagtggatgcctcaaagtaaat
gaaaatagtgttgagcctatgatgctgggtacaatagcgtcacagtattacctttgctac
atgaccgtgtctatgtttggctctaatataggttctgacacatcgcttgaagcatttttg
catatcttggctggtgcttctgagtatgatgaacttcctgtgcggcacaatgaggaaaat
tacaacaaaacactgtcagataaagttcggtatcccgtggataataaccatctagatgat
cctcatgtcaaagcgaatctgctcttccaggcacatttttctcagttggcactcccaatc
agtgattataacacggatttaaagtcagtactggatcaaagcattcggatcctccaggcc
atgattgatatctgcgcaaacagtggatggctctcaagctcgctgacgtgtatgcgcctt
ttgcaaatagtcatgcagggtatgtggtccgatcaagattcgtcattatggatgatccca
tgcatgaatgatgatcttctaggatctctgaccgcaagaggaattcacacgctgcatcag
ctattagagattccaaaggaaactctacaaagcgtaaccggaaacttccctgcatcaaga
ttatctcaggatctccaacgatttccgcggatccgaatgaatgtgagactccaaaagaag
gattctgatggcaaaaaaatgccttcaatgctggaaatcagaattgagaagatatcaaag
aggaatagctcaagggcgttggcccctcgattcccaaaggtgaaagacgaagcctggtgg
ttggttcttggtgatacttcaacttctgagctatttgctgtgaagagagtttcgttcacc
ggtcgcctgaccacccgtatggagttacctcccaatgtaacctctttccagaatacgaaa
ctcatcttggtttcggattgttatttggggtttgagcaagaacactccattgaacaacca
gcacggcgctga
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integrated database retrieval system
