Camelina sativa (false flax): 104726789
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Entry
104726789 CDS
T05044
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD1 isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
csat
Camelina sativa (false flax)
Pathway
csat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104726789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104726789
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104726789
Membrane trafficking [BR:
csat04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
104726789
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
104726789
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104726789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank
PH
Ank_3
Ank_2
Ank_5
BAR
Ank_4
PH_11
PH_8
DUF6444
ANK_LRRK2
PH_20
PH_13
BAR_2
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
104726789
NCBI-ProteinID:
XP_010444033
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All DBs
Position
11:46618981..46624404
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AA seq
831 aa
AA seq
DB search
MHFSKLDDSPMFRQQMQSMEESAELLRMRCLRFYKGCRKYTEGLGEGYDADIGFVNALES
FGGGHNDPICVAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQFVNGDVHEVKE
ARKRFDKATIIYDQAREKYLSLRKSTRLDVAATIEEDLHSARTTFEQARFHLVSALSNAE
AKKRFEFLEAVSGTMDAHLRFFKQGYELLHQMEPFINQVLAYAHQSRECANYEMASLNER
MQEYQRQVDRETRNSNGSPTGDGMRHNSRNSQKVIEAVMQSAAKGKVQTIRQGYLSKRSS
NLRGDWKRRFFILDSRGMLYYYRKPWNWSSGNGSRSVVHRNMTSENSPGLLSRWLSSHYH
GGVHDEKPVARHTVNLLTSTIKVDADQTDLRFCFRIISPTKVYTLQAENAQDQMDWIEKI
TGVIASLLSFQTPERAIMRLSTVDGGDTFSASDSGSLADPYDIEQAESGESTVENPMTGG
NRSRFSGCLQQHDMVKTEKPIDVLTRVVGNEKCADCGAPEPDWASLNLGVLICIECSGIH
RNLGVHISKVRSLTLDVKVWEPSVLTLFQSLGNVYVNSVWEEQLNSESRSSSASRSSGTP
KSDRPRKLVVRKPGFNDPISVKELFIHAKYSERIFVRKAIDSQHFQALFQEIWENVRAND
KKSVYRHIVCSEADVNALRGQASYTVSMPLAKMMQLEAKEETLEAKFKSIEKEFQENPEG
YSQSSRTGESMVREETSNDCSLLHLACLSGDIGMVELLLQYGAKINATDSKGRTPLHHCI
ISRRYAIARLLLMRGGDPNAVDKENNIPVKYASETDLNDNELIALLTDSKR
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgcatttctcaaagctcgatgattctcccatgtttcgccaacagatgcaatctatggaa
gagagtgccgagttgctgcgaatgcgatgcttaaggttctataaaggatgcaggaaatac
acggaggggcttggagaagggtatgatgcagatattggctttgttaatgctcttgaatct
ttcggaggaggtcataatgatcccatctgtgttgcttttggaggtcccgttatgactaaa
ttcaccattgctctacgagaaatcgggacatacaaggaagttcttcgttcccaggtagaa
cacatgctgaatgatcggttgcttcaatttgtgaatggtgatgtccacgaagttaaggaa
gctcgtaaacggtttgacaaagctaccattatatatgaccaggcacgagagaaatatctt
tcattaaggaagagtacgcgattggatgtggctgccacaattgaggaggacctacatagt
gcaagaacgacgttcgagcaagcacgatttcatctggttagtgcactctctaatgcggag
gctaaaaagagatttgaatttttggaagcagtaagcgggactatggatgctcatctccgt
ttcttcaaacagggttatgagctactacatcaaatggagccttttattaatcaggtgttg
gcttatgcacaccagtctagagaatgtgcaaattatgagatggcatccctcaatgaaagg
atgcaggagtaccaaaggcaagttgatcgtgaaactagaaactcaaatggttctccaaca
ggggatggcatgagacataactcaagaaactcacagaaagtcatagaggccgtcatgcaa
tctgctgcaaaaggaaaggttcagactatcagacaagggtatttgtcaaaacgttcctca
aacttgagaggtgactggaaaagaagattctttatccttgatagccgtgggatgctatac
tattaccgcaagccatggaattggtcttctggaaatggtagtcgctctgttgttcatagg
aatatgacttcagaaaacagtcctgggctgctaagtcggtggctgtcttctcattaccac
ggcggtgtgcatgatgaaaaaccagttgcacgtcacactgtcaatctgctgacctcaacg
atcaaagttgatgcagaccagaccgatcttagattctgctttcgaataatttcaccaaca
aaagtttatacattgcaggcagaaaatgcgcaggatcagatggactggatcgaaaaaata
actggagtaattgcttctttgttgagtttccagacacctgaaagagcaatcatgcgtctt
tctactgtggatggaggtgataccttctctgcaagtgattctggttctttagcagatcca
tatgatatcgaacaagcagaaagtggagaatccacagtggaaaatcccatgactggagga
aaccgttcgaggttttcagggtgcttgcagcaacatgatatggtaaagactgaaaagcca
attgatgtcttgacaagagtcgtggggaatgagaaatgtgcagactgtggtgctcctgaa
cctgattgggcatctttgaaccttggtgtccttatttgtattgagtgttctggtatccat
cgtaaccttggtgttcacatttcaaaggtcagatcgctcactcttgatgttaaagtatgg
gaaccatcagtcttgacattattccaatcgttaggtaacgtgtatgtaaactcagtttgg
gaagagcagttgaactcggagagtagatcttccagtgctagtaggtcttcgggcactccc
aagtcagatcgacctagaaagttggttgtaaggaagcctggtttcaatgaccccatttct
gtgaaagagttgttcatccacgcaaagtactcagagaggatttttgtgcgcaaagcaata
gatagtcagcatttccaggcacttttccaagagatatgggagaatgtccgtgccaacgac
aagaaatcagtttacagacacattgtctgctcggaagcagatgtgaatgctctgcgtgga
caagcatcgtacactgtgtctatgcccttagcaaagatgatgcaactggaagctaaggag
gaaacccttgaagccaaattcaagagcattgaaaaggaatttcaagagaatccagaggga
tattctcagtcaagtaggaccggagagagtatggtcagagaagaaacttcaaatgactgt
tctttgcttcaccttgcttgtctttctggggatatcggtatggtggaactattgcttcag
tatggcgcaaaaataaatgcaacagattcaaaaggtcggactccacttcatcattgtatc
atcagcaggagatatgcaattgcaaggttgctacttatgaggggaggagatccaaatgct
gtggataaagagaataacataccggtcaaatatgcttcagaaacagacctcaatgacaac
gaactgattgctttattaacagactccaaaagatga
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