Camelina sativa (false flax): 104726814
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Entry
104726814 CDS
T05044
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104726814
03036 Chromosome and associated proteins [BR:
csat03036
]
104726814
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104726814
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
Helicases
104726814
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104726814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
NatA_aux_su
YIEGIA_cap
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104726814
NCBI-ProteinID:
XP_010444062
LinkDB
All DBs
Position
11:46731988..46735668
Genome browser
AA seq
670 aa
AA seq
DB search
MPSLMLSDKKEEKKIALETPELDSKKGKKEAKLKFSSSDEEDSEKKKSKRKEKKRKAAEA
EEEEEGKSDSSSEKKKKKKSSKKVKLGIEDVEVDNPNAVSKFRISAPLREMLKKNGIEAL
FPIQATTFDMVLDGADLVGRARTGQGKTLAFVLPILESLINGPAKSKKKNGYGRPPSVLV
LLPTRELAKQVNADFETYGLALGLTSCCVYGGEGYSFQQNSLRKGVDIVVGTPGRVKDFI
NTEKIDLSYLQFRVLDEADEMLRMGFVEDVEFILGKVEDATKVQTLLFSATLPPWVKDIS
RKFLKKDLKTIDLVGNDKMKASNSVRHIAMPCNKAAMPRLIPDIISCYSSGGQTIIFAEK
KEEANELSGLLAGSRTLHGDIQQSQREVTLAGFRNGKFSTLVATNVAARGLDINDVQLII
QCEPPRDVESYIHRSGRTGRAGNTGVAVTLYESRKSSISRIEREAGIKFEYLSAPQPNDI
ARAGGMDAAEKIKQVCDSVVPAFLEAAKKLLENSGLSAEVLLAKALAKTAGFTEIKKRSL
LTSMENHVTLHLEAGRPIQSPSYVYGMLRRVLPEDKVERIEGLSLTADKSGAVFDVVQSD
LDLFLAAGQKNAGSMSLEVVKEMPKLQEREPLPQRRFGRGGSRYGNGGGRFGSGGGGRGG
RGGGRGGGRW
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgccttcactaatgttatccgacaagaaagaggagaagaagatagccttggaaacccca
gagcttgactctaagaaggggaagaaggaggcgaagctgaagttttcctcttcggatgag
gaagactcggagaagaagaagagtaagaggaaggagaagaagcgtaaggctgcggaggcg
gaggaggaggaggaagggaagagcgattctagctctgagaagaagaagaagaagaagagc
agcaagaaggttaagttgggtattgaagatgttgaagttgataaccctaacgctgtttcc
aagtttaggatctcggctccgttgagggagatgcttaagaagaatggtatcgaagctctt
ttccctattcaagctacaacgtttgatatggttctcgatggtgctgatttagttggacgg
gctcgtactggtcagggtaaaacactggcctttgtgttgcctatattggaatcattgatc
aatggacctgcgaaaagcaaaaagaagaatgggtatggccggccaccaagtgttttggtc
cttttacccaccagagaattggccaagcaggtgaatgctgactttgaaacatacggatta
gcacttgggttaacttcttgctgtgtctatggaggtgaaggttattctttccagcagaat
agtttaaggaaaggtgttgacattgtggttggaacccctggtcgtgttaaggattttatt
aataccgagaaaattgatctgagctatctacaattccgtgtgcttgatgaagctgatgaa
atgttgaggatggggtttgttgaggatgttgaatttatattagggaaagtggaagatgct
actaaagtccagactcttctcttcagtgctactctgcctccatgggttaaagatatctct
cgcaagtttcttaaaaaagacctgaagactattgatcttgttggtaatgataaaatgaag
gccagtaatagtgtacgacacattgctatgccctgtaataaggcagccatgcctcggttg
attcctgatattatcagttgctatagcagtggaggccaaaccattattttcgctgagaaa
aaagaggaagcgaacgagctttctggtttgttggctgggtcaagaactttgcatggagac
atacagcaatcacaacgcgaggttactcttgctggatttaggaatggcaagttttcgaca
ttggtggctactaacgttgctgctcgtggtctagatatcaatgatgtgcagttaattata
cagtgtgagcctccacgtgacgttgaatcatatattcatcgttcaggcagaacaggcaga
gctggcaacactggagttgcagttacactttacgaatctagaaagtcaagtatatccagg
atcgaaagagaagctggtataaaatttgagtacttgtctgctcctcagcctaatgatatt
gccagagctggtggtatggatgctgctgagaaaattaaacaagtttgcgacagtgtggtt
cctgcattcttggaagctgcgaagaaattattagaaaattctggtttatcagctgaagta
ctcctcgcaaaagctcttgcaaaaacagcgggcttcactgagattaagaaaaggtcactt
cttacatcaatggagaaccatgtaacactacatcttgaagcaggaagaccaatacaatcg
ccgtcatatgtttatggaatgctaagaagagttttaccagaagacaaagtggagcggatt
gaagggttgagtctaacagcagataaaagcggagcagtgtttgacgttgtgcaatcggat
ctagacttattccttgcagctggacaaaagaatgctggaagtatgagcttggaagtggtt
aaggagatgcctaaacttcaggagagagaaccattgccacaaagaagatttggtcgcggc
ggaagcaggtacggcaatggtggtggaaggttcggcagtggtggtggcggcagaggagga
agaggtggcggtagaggaggaggtaggtggtag
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