KEGG   Camelina sativa (false flax): 104726917
Entry
104726917         CDS       T05044                                 
Name
(RefSeq) histone deacetylase 6
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
csat  Camelina sativa (false flax)
Pathway
csat03082  ATP-dependent chromatin remodeling
csat03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    104726917
   03083 Polycomb repressive complex
    104726917
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csat03036]
    104726917
Enzymes [BR:csat01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     104726917
Chromosome and associated proteins [BR:csat03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     104726917
   HDAC complexes
    Sin3A-HDAC complex
     104726917
    BRAF-HDAC complex
     104726917
    REST complex
     104726917
    SHIP complex
     104726917
    MiDAC complex
     104726917
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     104726917
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    104726917
  Chromatin remodeling factors
   NuRD complex
    104726917
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 104726917
NCBI-ProteinID: XP_019093778
LinkDB
Position
2:complement(26721131..26724604)
AA seq 472 aa
MEADESGISLPSGPDGRKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIIHYHLHRR
LEISRPNLADASDIGRFHSPDYVDFLASVSPESMGDPSSARNLRRFNVGEDCPVFDGLFD
FCRSSAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFR
RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDVGAENGKYYALNVPL
NDGMDDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFL
RSYNIPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNNLPFNEYFEYFGPDYTLHVDPG
PMENLNTPKDMEKIRNTLLEQLSGLMHAPSVQFQHTPPVNRVLDEPEEDMETRPKPRIWS
GTAAYESDSDDDDKPLHGLSGLDGPAMDRDSTGEDEMEDDDNPEPDVTPPSS
NT seq 1419 nt   +upstreamnt  +downstreamnt
atggaggcagacgagagcggtatctccttgccgtcaggacccgacggtcgtaagcggcga
gtcagttacttctacgagccaacgatcggtgactactactacggtcaaggacatccgatg
aaacctcaccggatccgtatggctcatagcctaatcatccactatcatctccaccgtcgc
ttagaaatcagccgtcctaacctcgccgacgcctccgatatcggccgctttcattccccc
gattatgttgatttcctcgcttccgtttcgccggaatctatgggcgatccttcctctgca
cgaaacctaaggcgattcaatgtcggcgaggactgtcctgtcttcgacgggctttttgat
ttttgccgttcttccgccggtggttccattggcgccgccgtcaagttaaacaggcaggac
gctgatatcgctatcaattggggcggtgggcttcaccatgccaagaaaagcgaggcctct
gggttttgctatgttaatgacatcgttcttgggattcttgagttgctcaagatgtttagg
cgggttctctacgtagacatcgatgtccatcatggagatggagtggaagaagcgttttac
accactgatagagtgatgactgtttctttccacaaatttggggactttttcccaggaact
ggtcacataagagacgtcggcgcagaaaatgggaagtactacgctctaaatgttccatta
aacgatggtatggacgatgagagtttccgcagcttgtttagacctcttatccagaaggtt
atggaggtgtatcagccagaagcagttgttcttcagtgtggggctgactccttaagcggt
gatcggttgggttgcttcaacttatcagtcaagggtcatgctgattgcctccgattctta
agatcttacaacattcctctcatggtcttgggtggtggagggtatactatacgaaatgtt
gcccgttgctggtgttatgagactgcagtagcggttggagtagagccggacaacaatctc
ccattcaatgagtattttgagtatttcggcccagattatacgcttcatgtcgacccaggt
ccaatggagaatttaaacactccaaaagatatggagaaaataaggaacacattgctagaa
caactttcgggactaatgcatgcacctagcgtgcagtttcagcatacaccaccagtaaat
cgagttttggacgagccggaagaagacatggagacgagaccaaagcctcgcatctggagt
ggaactgcagcttatgaatcagacagtgacgatgatgataaacctcttcatggtttatca
ggtcttgatggcccagctatggacagggactctacaggtgaagatgaaatggaagacgat
gataacccagagccggatgtgactcctccatcgtcttaa

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