Camelina sativa (false flax): 104726924
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Entry
104726924 CDS
T05044
Name
(RefSeq) probable pectate lyase 22
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104726924
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104726924
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104726924
NCBI-ProteinID:
XP_010444198
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Position
11:complement(47289568..47291632)
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AA seq
413 aa
AA seq
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MLHSSSYLSFTLLVFFFCCIIFSTLASSLPVSDPELVVEEVHRKINELMSRRKLGFFSCG
TGNPIDDCWRCDKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPKPGTL
RYAVIRDEPLWIIFNRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNIIIH
GLHIHDCKQGGNTYVRDSPEHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIR
GSTAITISNNYLTHHNKVMLLGHSDTYEQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
VNNDYTHWEMYAIGGSANPTINSQGNRFLAPDDSDSKEVTKHEDAPESEWQSWNWRSEGD
LMLNGAFFTYSGAGPTKSSSYSKASSLAARPSSHVGEITVASGALSCKRGSRC
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgctacattcttcttcatatctatccttcacacttcttgtctttttcttctgctgcatt
atattctccacgctcgcttcgtctttgcccgtttccgaccctgagctcgttgtcgaggaa
gtacacaggaaaataaatgagttgatgtcaagaaggaagctagggttcttctcttgcggg
acaggtaatccaatcgatgattgttggcgatgcgacaaggactgggagaaaaaccgaaaa
cggttggccgattgcggaatcggttttggtaaaaacgcaattggtggtcgtgatggtgaa
atctacgtggtgactgatccaggaaacgacgatccagtaaaccctaaacccggaacacta
agatacgcagtcattcgagatgaaccgctatggatcatttttaaccgagacatgacgatc
caactaaaagaagaactcataatgaattctttcaaaaccttagacggacgaggagcctcc
gtacacatctctggtgggccgtgtataaccatacaatatgtgaccaacatcatcatccat
ggcttacacatacatgattgcaagcaaggtgggaatacttacgtacgagactcgccagag
cattacgggtggagaacgatatccgacggtgacggtgtgtccatcttcggaggaagccac
gtgtgggttgatcattgctcgctctcgaattgcaacgatgggttaattgatgcgattcgt
ggatcaacggctataacgatctctaacaattatttgacgcatcacaacaaggttatgtta
ttgggacatagcgatacgtatgaacaagacaagaatatgcaagtcactatcgcttttaac
catttcggagaaggcctcgtccaaagaatgccaaggtgtagacatggatatttccatgtg
gtgaacaatgactatacacattgggaaatgtatgcaattggaggaagtgctaatcctacc
atcaactctcaaggcaaccgttttcttgctcctgatgactctgatagcaaagaggtaaca
aagcacgaagatgcgcccgaaagcgaatggcaaagctggaattggagatccgaaggagat
ctaatgcttaacggcgcatttttcacgtattctggcgctggaccaactaaatcgtcaagc
tattcaaaagcttcaagcctagccgcgagaccgtcctctcatgttggtgaaataactgta
gcttcgggtgcactcagctgcaaaaggggttcccgctgctga
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