Camelina sativa (false flax): 104727052
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Entry
104727052 CDS
T05044
Name
(RefSeq) serine/arginine-rich splicing factor SC35
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104727052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104727052
Spliceosome [BR:
csat03041
]
Common components
Common spliceosomal components
SR proteins
104727052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_Nup35
RRM_5
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
104727052
NCBI-ProteinID:
XP_010444350
UniProt:
A0ABM0UPZ7
LinkDB
All DBs
Position
11:complement(47851817..47854204)
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AA seq
305 aa
AA seq
DB search
MSHFGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFA
FVRYKYKDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRVVEPPPKSRRSRSRS
PRRSRSPRRSRSPSRRRSPRRSRSPRRRSRDDYREKNYRKRSRSRSYERRERHQEKDRDH
RRRSRSRSASPDDKRRVRGRYDNESRSHSRSLSASPARRSLSPRSSSPQKASPPREVSPD
KRSYERSPSPRRSLSPRSPSLQKASPSKEISPERRSNERSPSPGSASPRGKAAAASRSQS
PYAAE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcactttgggaggtcaggtccaccggatatcagtgacacctactcacttctcgtc
cttaacatcaccttccgtacgactgcggatgatctatatcctctattcgcaaagtatggc
aaggtcgttgatgtctttatccccagagatcgaaggactggtgattctcgtggttttgcg
tttgttcggtacaagtataaagatgaagctcacaaagcagtggaaaggcttgatggaaga
gttgttgatggccgggaaataactgttcagtttgctaaatatggccctaatgctgagaag
atttcgaaaggaagagttgtggaaccaccaccaaagtcacgaaggtcaagaagccgaagt
cctaggaggagtcgtagtcctcggaggagccgtagcccgtctagacgccgcagtcctaga
agaagccgcagtcctcggaggaggtccagagatgattatagggaaaaaaactaccggaag
aggagcaggagccgaagctatgagaggcgtgaaaggcatcaggagaaggatagagatcat
cgtcggcgcagtaggtctcgtagtgccagcccagatgacaaacgcagagtcagaggccgt
tatgataatgagagccgcagtcacagtcgctccttaagtgcatctcctgctcgccgcagc
ctcagccctagaagttcctccccacaaaaagcctctcctcctagagaagtttctcctgat
aagcgtagctatgagaggtctccatctcctcgtcgcagcctcagcccaagaagcccttct
ttgcaaaaggcctctccttctaaagagatttctcctgaaaggcgtagcaatgagagatcc
ccatctcctggtagcgcttctccccggggcaaagctgctgctgcttctcgaagccaatct
ccttatgctgcggaatga
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