Camelina sativa (false flax): 104727170
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Entry
104727170 CDS
T05044
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104727170
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104727170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
IFT20
PspA_IM30
YkyA
COLEC12
Hydantoinase_B
DUF8076
Golgin_A5
Motif
Other DBs
NCBI-GeneID:
104727170
NCBI-ProteinID:
XP_010444499
UniProt:
A0ABM1QP92
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Position
11:48369789..48372566
Genome browser
AA seq
436 aa
AA seq
DB search
MSSPFSEEILIDKLAKLNSTQQSIQTLSQWCIVHRSEAELVVTTWEKQFHSTEIVQKVPL
LYLANDILQNSKRQGNEFVQEFWKVLPGALKDLVSLGDDHGKSVVSRLVTIWEERRVFGS
RSKSIKDVMLSEEAPPPLDINKKRSRGSKSAKRDSKSAKTKLSSGGVTEKIVSAFNLVRA
ENSNKETEINKCKSTIKRIRTMEKDVEDACSTAKDPRRKTLAKELEEEEITLRQSVVKLK
SIEENRTSLVKHLREALREQESELEDLQSQIQVAQVQTEEAQNMQKRLNNEIPVNSNNGS
SGQSAKATPASIAAMAEMLTSSTNSSMIMHSVLSSFAAEATTQTSGLTKSSSADTNAFAP
PNPQYHMIPNPAASQQFIPYGFGNIPLMPPGQLPPPPGSLSPHMMSNQQNAAQQQSQQGQ
SFQPPGMMYFGPPHHS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtccattcagtgaagagatactgattgataagctcgctaagctcaacagcact
cagcaatcgattcaaactctgtcacagtggtgtatcgtccatcgtagtgaagctgagtta
gtggttactacatgggagaaacagtttcacagtacagagatagttcagaaagtgcctctc
ttgtaccttgcgaacgacatacttcagaacagcaagcgtcagggtaatgagtttgtgcaa
gagttctggaaagttctccctggtgctctcaaagatcttgtttccttgggagatgatcat
gggaaaagcgtggtctcacgattggttactatatgggaagagagaagagtctttgggtct
cgttcaaagagtattaaagatgtaatgctctcagaagaagctcctccaccgcttgatatc
aataaaaaacgatcacgaggatccaaatcagcgaaacgggattcaaaatctgccaaaacg
aaattatcaagtggaggtgtgacggagaagatagtatctgcatttaatttggttcgcgca
gagaactcaaacaaagagacagagataaacaaatgcaagtctacaattaaacgtatcaga
acgatggagaaagatgttgaagacgcctgttccactgcaaaagacccaaggagaaaaaca
ttggcaaaagaattggaagaagaagaaatcactctgagacagtctgttgtcaaacttaaa
tctattgaagaaaatagaacatcccttgtaaaacatcttagggaagcgctacgtgaacag
gaatctgaattggaggatcttcaatctcagatacaggtagcacaagtgcaaacggaagaa
gctcaaaacatgcagaaacggctcaataatgaaataccggttaacagtaacaacggatca
tctggccaatcagcaaaagcgactcctgcctcaatcgctgcaatggcagaaatgctaact
tcatctacaaattcatcaatgattatgcattctgttctgtcttcatttgctgccgaagct
actacacagacttctggtttaaccaaatcgagtagtgcagacacaaatgcatttgctcct
ccaaatccgcagtatcacatgatcccaaatccagccgcatcgcagcagtttataccatat
ggatttggtaacattcccctaatgccacctggacaactaccaccacctcctggatcactg
tcgccgcatatgatgagtaatcaacaaaacgcggctcagcaacaatcgcaacaaggtcag
agttttcaaccaccgggtatgatgtattttggacctccacaccattcttaa
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