Camelina sativa (false flax): 104727263
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Entry
104727263 CDS
T05044
Name
(RefSeq) WD repeat-containing protein RUP1-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat04120
Ubiquitin mediated proteolysis
csat04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104727263
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
104727263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104727263
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104727263
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104727263
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104727263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_SCAP
WD40_like
Beta-prop_DCAF4
Beta-prop_DCAF12
PQQ_2
YNR034W-A-like
Motif
Other DBs
NCBI-GeneID:
104727263
NCBI-ProteinID:
XP_010444626
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All DBs
Position
2:16913105..16914480
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AA seq
389 aa
AA seq
DB search
MEALFCSEIPNNNIRSSINDLSYSSSSSSSSYTWPMIMTSSSSLSHTIMETDNNIPRCDW
DLSLSAVVSSASTGSDAIGTIEFDPTGEIIATGGIARKIRTYRLSSLLRSRDDHVTASES
CICTPAKLSSLRWRPDLSGRVIGSGDYDGVVTEYDVEKQVPVFERDEHGGRRIGSMDYTL
HNGSLIGASGSDDGTVQMWDPRNGGSLEEMVRPGGGAAVCSVEFDPFGGASLAVGCADRN
AYVYDIRRLVDPLIVLDGHTKTVTYARFMDPHTIVTGSTDGSLKQWDINNGRRVVRTYRG
HVNSRNFVGLSVWRHGGLVVSGSENNQVFVYDKRWEEPVWVCGLGQTDRFGSDRRFVSSV
CLRQVDEDWCTLVAGGSDGVLEIFSGKRS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggaggctttgttctgctctgagataccaaataacaacatcagatcctccattaacgat
ctctcttactcttcttcttcttcttcttcttcatatacatggccaatgatcatgacctcc
tcttcttctttatctcacacaatcatggaaacagataacaacattcctagatgcgactgg
gatctttctctctccgccgttgtttcctctgcatccaccggatcagacgctatcggaaca
atcgagttcgaccctaccggagagatcatagctacaggaggtatcgcaagaaagatcaga
acgtaccgtttgagctctttgttaaggtcacgtgacgatcacgttacggcttcagagagc
tgtatatgcacgccggcgaagctaagcagtctcagatggagacccgatttatccggtcgg
gttatcggatcgggagactacgacggggttgtcacggagtacgacgtcgagaaacaagtt
cctgttttcgagagagacgagcatggaggtagaaggattgggagcatggactacacgcta
cacaatggctctcttataggcgcgtcgggctccgacgacggaacggttcaaatgtgggat
ccacgtaacggagggtcgttggaggaaatggttaggcccggaggcggcgcggcggtctgt
tcggtagagtttgatccgttcggtggagcttccctagccgtcggatgtgctgaccggaat
gcttacgtgtacgacatcagaagactcgttgatcctttgatcgtattagacggtcatacc
aaaacggtgacgtatgctcggttcatggatcctcatacgatcgtcaccggttcgaccgac
gggagcttgaagcaatgggatataaacaacggacggcgcgtggttcgaacgtaccggggg
catgttaacagccggaattttgtcgggttgtcggtttggagacatggtggtttggtcgtg
tccgggtccgagaataaccaagtgtttgtgtatgataagaggtgggaggaaccggtttgg
gtgtgtgggttgggtcaaacagaccggtttgggtctgaccgacggtttgtgagcagtgtg
tgtttgagacaagtggatgaagattggtgcacacttgtggccggaggatccgatggggtt
ttagagattttctcgggcaaacggagctaa
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