Camelina sativa (false flax): 104727306
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Entry
104727306 CDS
T05044
Name
(RefSeq) small RNA degrading nuclease 3-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104727306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104727306
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
RNases
104727306
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RRM_fung
Motif
Other DBs
NCBI-GeneID:
104727306
NCBI-ProteinID:
XP_010444677
LinkDB
All DBs
Position
11:49042633..49046053
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AA seq
641 aa
AA seq
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MEHKLATAEKKMLVDLVKLVQRRGLEGENGGWKEFLNVYDKKFGSSLSDPARRSNDVLVA
FLMSFKKKEDMQLIARIMQCGANRDLIEKFKEESPAKETPEQRLVRLTIAHYQYPTAYSF
PSHSEDWYVTSLGKKKSKVVKSTRMLAIDCEMVTCEDGTDAVVRVGAVDRDLKVVLDKFV
KPDKPVLNYKTDITGVTAEDLERATLSVTDIQKKLRRFLSVGTILVGHGLHNDLEVLRID
HARVIDTSFVFEFANAPKHKRPSLNNLCKYVLGEELRMADAAHNCVHDAAAAMKLVLAVV
ERGVETTIQRTPEMLEAEKARHEARQEAGKTQLLLHKIPPHVSSQELQGVLTGDFTLGVR
PPQKLGGFYTAVVDFSSPEEANQAFENVQADIGKDKGGLPQKEVAFQLSSGLKAKLFVRK
MVHDEISAPKRARTEEENNESSSKRQKREEDESEEINEAVVNQREADKKKLLLHKIPLSV
PSEELQGAISGNFTLETMPARRKGRYYNAVVSFKSAEEANEAFENVRGDAVKDQGGLAQK
MVAFKLSSGSGTCLYVRKMVQDESEEEAKKENVNHCEDHLKEIEALKEKLKAKDFANSSE
GQSKEIEELKLKLKAKEHQIIAQDKIIANLKAKLEKKQSKC
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggagcataaactagctactgccgagaaaaaaatgctagtagacttggtgaagctagtc
cagagacgtggtttagaaggcgaaaatggaggatggaaggagtttttgaatgtttacgac
aaaaagttcgggtcgagtttgagtgatcctgcgagacgttccaatgatgttttggttgct
tttcttatgtccttcaaaaagaaagaagatatgcagttaatagctaggatcatgcaatgt
ggtgctaatcgtgatctaattgagaaattcaaggaagaatcaccggctaaagagactcct
gagcagagactagttcgattgactattgcgcattaccagtaccctacagcctattccttc
ccttctcattccgaggattggtatgtaacttcgcttggtaagaagaagtctaaagtggtt
aaatctaccagaatgcttgctattgattgtgagatggttacctgtgaagatgggaccgac
gctgtagttagagttggcgctgtggaccgcgacttaaaggtggttcttgacaaatttgtg
aaaccggacaaaccagttcttaactataagacggatattactggagttactgctgaggat
cttgagagagctactctatctgttacagatattcagaaaaaattgcggaggtttctttct
gtaggaactattttggtagggcatggtttgcataatgatcttgaagtgttgaggatagat
catgcgagagtaatagatacttcatttgtatttgagtttgccaatgcaccaaagcataag
agaccttctttgaacaatctatgcaagtatgttttaggtgaagaactgcgaatggctgat
gctgctcacaattgtgttcatgacgcagcagctgccatgaaacttgtacttgctgttgta
gaaagaggagtagagactacaattcaacgaactccagaaatgttggaggctgagaaggca
agacatgaggcaagacaagaagctggtaagacacaacttctccttcataaaatccctccc
catgtttcatctcaagagttacaaggagttcttaccggtgatttcaccctcggtgttagg
ccaccacaaaaactaggaggtttctatactgcagtcgttgattttagtagtccagaagaa
gcaaatcaagcatttgaaaatgtacaagcagacatagggaaggataaagggggtttgcca
caaaaagaggttgcgtttcagctgagttcaggattaaaagctaaattatttgttcgtaaa
atggttcatgatgaaatatctgcaccaaagagagctagaacagaggaggagaataatgag
agttcctctaagagacaaaagagagaagaagatgaatctgaggagatcaatgaagcagtt
gtaaaccaaagagaggctgataagaaaaagctcctccttcataaaatccctctcagcgtc
ccgtctgaagagttacaaggagctatttcaggaaatttcacacttgaaaccatgccagca
agaagaaaaggaagatattataatgcagttgttagttttaagagtgcagaagaagcaaat
gaagcatttgaaaacgttagaggagacgcagttaaggatcaagggggtttggcacaaaaa
atggttgcgtttaagctgagttcaggatcaggaacttgtttatatgttcgtaaaatggtt
caagatgaatctgaggaggaggccaaaaaggaaaatgtaaaccattgtgaggatcattta
aaggaaattgaagcactgaaggaaaaactcaaagctaaggacttcgcgaacagctctgaa
ggtcagtcaaaggaaattgaagaactaaagctgaaactcaaagccaaggaacatcagatc
atagctcaggataagattatagctaacctcaaagcgaaattggagaagaaacagtcaaag
tgttga
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