Camelina sativa (false flax): 104727551
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Entry
104727551 CDS
T05044
Name
(RefSeq) transformation/transcription domain-associated protein-like
KO
K08874
transformation/transcription domain-associated protein
Organism
csat
Camelina sativa (false flax)
Pathway
csat03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104727551
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
csat01001
]
104727551
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104727551
03036 Chromosome and associated proteins [BR:
csat03036
]
104727551
Protein kinases [BR:
csat01001
]
Serine/threonine kinases: Other
PIKK family [OT]
104727551
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104727551
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
104727551
STAGA complex
104727551
TFTC complex
104727551
TIP60 complex
104727551
SAGA complex
104727551
SLIK complex
104727551
NuA4 complex
104727551
Chromatin remodeling factors
ASTRA complex
104727551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tra1_central
Tra1_ring
FAT
PI3_PI4_kinase
FATC
Pox_J1
TPR_21
Motif
Other DBs
NCBI-GeneID:
104727551
NCBI-ProteinID:
XP_010444949
LinkDB
All DBs
Position
11:2307268..2321806
Genome browser
AA seq
2821 aa
AA seq
DB search
MSPIQNFEQHSRRLVEPDLPIQARLEMVVEVRDSLEITHTAEYLNFLKCYFRASSVILFQ
ITKPQFTDNLEHKLRNIVVEILNRLPHSEVLRPFVQDLLKVAMQVLTTDNEENGLICIRI
IFDLLRNFRPTLENEVQPFLDFVCKIYQNFRSTVCHFFDYVKMEEVKPMEISTPSDQSLS
ITAPSRNGQINPSTRSFKIVTESPLVVMFLFQLYSRLVQINIPNLLPLMVAAISIPGPEK
VSSHMKPQFIELKGAQVKTVSFLTYLLKSCAEYIRPHEKSICKSIVNLLVTCSDSVSIRK
ELLVSLKHVLGTDFKRGLFPLIDTLLEERVLVGTGRACFESLRPLAYSLLAEIVHHVRAD
LSLSQLSRIIYLFSRNMHDSTLSLNIHTTCARLMLNLVEPIFEKGVDQHSMDEARILLGR
ILDAFVGKFNTFKRTIPQLLEEGDGKDQITLRSKLELPVQAVLNLQVPAEHSKEVNDCKN
LIKTLVMGMKTIIWSITHAHLPRPQGMHPQALASQSSASQVFKGMREDEVLKASGVLKSG
VHCLALFKDKDEEKEMLNLFSQILAIMEPRDLMDMFSVCMAELFECMIDNTQLVQIFATL
LQAPKVYKPFADVLINFLVSSKLDVLKNPDSAATKLVLHLFRCLFGAVSKTPSDFERILQ
PQVPIIMEVCMKNATEIENTLGYMQLLRIVFRGLAGCKFELLLRDLIPMLLPCLNILLTM
LEGPAGEDMRDLLLELSLTLPARLSSLLPYLPRLMRPLVSCLRGSDELVSLGLRTLEFWV
DSLNPDFLEPSMANVMSEVILALWSHLKPVPYPWGGKALQIVGKLGGRNRRFLKEPLTLE
CKDNPEHGLRLVLTFEPSTPFLVPMDKFINLAVAAVIQKNLTTDIFYKKQALKFLRVCLL
SQLNLPGCVTDEGQMTKQLSALLLSSVDSSWRRSEPTEVKADLGVKTKTQLIAEKSIFKT
LLITIIASSSDPDLSDSDDDFVVNICRHFAIILHGDCTSSYASTSTAPFGGSVSSTSSKP
NINWSTNLKHLDPLIFLDALVDVLADENRLHAKAALTALNVFAETLLFLARVKHADVLMA
KSGHSASMIVSSPSTNPVYSPHPSVRIPVFEQLLPRLLHCCYGSTWQAQMGGVMGLGTLV
GKVNVETLCLFQVKIVRGLVYVQKRLPIYASKEQDETSQVLMQILRVVNNVDEANSDARR
QSFQGVVEYLATELFNPNASITVRKNVQNCLALLASRTGSEVSELLEPLYQPLLQPLIMR
PLRSKTIDQQVGTVTALNFCLALRPPLLKVTPLGSAAGAHPRQSQRTDSDSAVTSSRQTA
DVGVVISNIKSVLELIDERVMLLADCKRPVTQILNTLLSEKGTDSSVLICVLDMLKRWAE
DDFGKTSLSGSSGAFLTQKDIVSFLQKLAQVDKQHFSSVALDEWDKAYLQLLYGLCADST
KYPLALRQEISLKVERHSMLGLRARDPDMRRKFFLLYHESLGKNLFARLQYIIQNQDWEA
MGDVFWLKQGLDLLLAILIEEKPITLAPNSARVVPLLSSQNPGTHYQPPAMPEGPEEVGS
MFDSIVMKHAQFLSAASKLQVADVVIPLRELAHTDANVAYHLWVLVFPIVWATLHKEEQK
ALAKPMISLLSKDYHKKQQGHRPNVVQALLEGLQLSHPQPRMPSELIKYIGKTYNAWHLA
LTLLETHVMLFTNESRCAESLAELYRLLNEDDRRFGLWKNRSNTTESRAGLSMVQHGFWQ
RAQSLFYQAMVKATQGTYNNTVPKAEMCLWEEQWLHCATQLGQWDALVDFGKSTENYEIL
LDSLWKAPDWAYLKDHVIPKAQVEETPKLRLVQACFALHEKNANGVGDAENIVGKGVDLA
LEQWWQLPEMSLHARVPLLQQFQQLVEVQESSRIYVDITNGSKVPGNAAVGGQGNHYADL
KDILETWRLRTPNEWDNMTIWYDMLQWRNEMYNVVIDAFKDFITSNTQLHHLGYRDKAWN
VNKLARIARKQGLYDVSVQILEKMYGHSQMEVQEAFVKIKEQAKAHLETKGELATGLNLV
NSTNLEFFLAKNKAEIFRLKGDFHLKLNDTEGANIAYSNAITLFKNLPKGWISWGNYCEM
AYQETQEEIWLEYAVSCFLQGIRFGVSNSRSHMARVLYLLSFDTANEHVGRTFDKHLDQV
PHWVWLSWIPQLLLSLQRTEAPHCKLVLMKIAAVFPQALYYWLRTYLLERRDAVNKSELS
RIVLAQRMQQNVPGVSAVHGGGNLPSETQIHQGAQTSGAVGTTRDNGNPHAQESERAAME
NNVNSGNDQPMNQSSSTINENSQHAVIRDGASLAMSAAGAFDAAKDIMEALRSKHNNLAS
ELEVLLTEIGSRFVTLPEERLLAVVNALLHRCYKYPTATTAEVPQPLKKELSGVCRACFS
ADAVTKHVAFVREYKQDFDFNVVDVEIPGQYFADQEVAPDHTVKLDRVGADIQIVRRHGS
SCRRLTLIGSDGSQKHFIVQTSLTPNARSDERILQVFRVMNQMFDKHKESRRRHIGLHTP
IIIPVWSQVRMVEDDLMYNTFLEVYENHCERNGRESDHPITYFKEKLNQAISGQISPEAI
GDLRLQAYGEITKNIVNDTIFSQYMYKTSMSGSHLWAFKKQFAVQLAVSNFMSFILQIGG
RSPNKILFAKNTGKMFQTDFHPSYDSNGMVELNEPVPFRLTRNMQAFLSHFGVEGPLMSN
MCSASQAVFSSKQNEHLRYQLAMFFRDELLSWFGRRPLGVPIPPVTGIATLSSAELKHKV
NLNVDDVIGRIRGIAPQYFCEEDENSVEPPQSVQRGVNELVEAALSPRNLCMMDPTWHPW
F
NT seq
8466 nt
NT seq
+upstream
nt +downstream
nt
atgagtccaattcagaattttgagcaacactctcgtcgtctcgtcgagcctgacctacct
attcaggctaggcttgagatggtggtggaggtcagggacagcctagagataacacatacg
gctgagtacttgaattttcttaaatgttacttccgggcctcttcagtgattctttttcag
attactaagccacagttcactgataatcttgagcataaactacgcaacatcgtggttgag
atcctcaaccgtctaccacatagcgaggttcttcgtccctttgttcaagacctcttgaag
gttgctatgcaggtgctcaccactgataatgaagagaatgggttaatctgcattcgcatc
atctttgatcttcttaggaactttaggccaacattagaaaatgaggttcaaccattcttg
gactttgtctgcaagatttaccagaacttcagatcgactgtttgccattttttcgactat
gtcaaaatggaagaagtgaaacctatggagatctctacaccatctgatcagtcgctctcc
attactgcaccttccagaaatgggcagattaaccctagtactcgttcattcaaaattgtc
acagagagcccccttgtcgttatgtttctttttcagctgtatagcagacttgttcagatc
aatatacctaatttgttgcccctgatggttgctgctatatcgattcctggccctgagaaa
gtttcttcacatatgaagcctcagttcatcgaactgaagggtgctcaggttaagacggtt
tcttttttgacttatttgttaaaaagttgtgcggaatatatcaggccgcatgaaaaaagc
atatgtaagagcattgtaaatttgcttgtcacctgttcggattctgtatctatcagaaag
gaactattagtctcactaaagcatgttcttgggacggatttcaagagaggtttatttcct
cttattgacactcttttggaagagagggttctagttggaacggggcgagcatgctttgag
tctttgagacctctggcatacagcctactggcagagattgttcaccatgttcgagcagat
ttatccctttctcagttatcacggatcatctacttattttcaaggaacatgcatgactcg
accctctctcttaacatccatacaacttgtgcacgactgatgttaaatctggtggaaccg
atatttgagaaaggtgttgaccagcattcaatggatgaagcacggattttgttgggacgt
atcctggatgcctttgttggaaaattcaataccttcaagcgtactatacctcagctttta
gaggagggtgacggaaaggatcaaatcactttgaggtcgaaacttgaacttcctgtccag
gcagttttgaatttgcaggttcctgccgaacattccaaagaagtgaatgattgtaagaat
ctgatcaagacactggtgatgggaatgaagacaatcatatggagtataacccatgcacat
ttgccccgacctcagggaatgcacccacaagctcttgcttcgcagtcatctgcttctcaa
gtttttaaaggaatgagagaagatgaggtgttgaaagcctctggtgttttaaaaagtggt
gtccattgcctagctctcttcaaagataaggatgaggaaaaggaaatgctaaatctattc
tcccaaattttggctattatggaacctcgagatctaatggatatgttctctgtatgtatg
gctgaactttttgagtgcatgattgacaatactcaactggttcaaatatttgccactctt
cttcaagctcccaaggtatacaagccatttgcagatgttctgattaatttcctagtaagc
agcaaacttgatgttctgaagaatccagattcagctgcaactaaattggttctgcatttg
ttccggtgcctctttggggctgtgtccaaaacaccatctgattttgaacgaatattgcaa
cctcaagtgcctattattatggaagtctgcatgaagaatgctactgaaattgaaaacact
cttggttatatgcaattgctccgaattgttttcagaggacttgctggatgtaaattcgag
ctgcttcttcgagatttaatccccatgctactaccttgtcttaatatacttctgacaatg
ctcgagggtccagccggtgaagacatgagagatcttttgttggaactttcgttgacactt
cctgcacgcttaagctccttattgccataccttccccgtcttatgaggcctcttgtatcc
tgtttaagaggaagtgatgaacttgtgagcttggggttacgcacccttgaattctgggtg
gatagtctgaatcctgattttttggagccaagtatggcaaatgtgatgtctgaagtgatc
ttagcattatggtctcacttgaagccggtgccatatccttggggtggtaaagcgttacag
attgtaggaaagttgggtggtcgcaatcgacgatttctgaaagagccacttacacttgaa
tgcaaagataatccagagcatgggcttcgcttagttctgacgtttgagccgtccactcca
tttcttgtgccaatggacaaattcattaatcttgctgtagcagctgttattcagaaaaac
ctcactactgacatcttctacaaaaagcaagctctaaaattcctccgcgtttgcttgttg
tctcaacttaatttgcctgggtgcgtcactgatgagggtcagatgaccaagcaattatca
gctttgttactttcctctgttgattcatcttggcgcaggagtgaaccaacagaagtaaag
gctgacttaggggttaaaacaaagacacagttaatcgctgagaagtcgatcttcaagaca
ctattgataactataattgcttccagttctgatccggatctcagcgactcagatgatgac
tttgttgtaaacatatgtcggcattttgcaattattttgcatggggactgtacctcgtcg
tatgcttccactagtactgctccattcgggggttctgtgagttcaacaagttccaagccc
aatatcaattggtctactaacttaaaacatctggatcctttgatatttttagatgctctt
gttgatgtgcttgcagatgaaaacaggctccatgccaaagctgctctgactgcgttaaat
gtgtttgctgaaactctgttgttccttgctcgtgttaaacatgctgatgtgctgatggct
aaaagtggtcacagtgcctctatgattgtctccagtccttctacaaatccggtctattca
ccccatccaagtgtacgaataccagtgtttgaacaacttttacctcggttgttgcattgc
tgttatgggagcacatggcaagcgcaaatgggaggagtaatggggttaggtacgctggta
gggaaagtgaatgtcgaaacattatgtcttttccaagtaaaaattgttcgtggtctggtt
tatgttcaaaagaggcttcctatttatgctagcaaagagcaagacgagacaagtcaggtt
cttatgcagattctaagagtggttaataatgttgatgaagcaaacagtgacgcccgcaga
caaagctttcaaggtgttgtagaatatcttgctactgaattgttcaatcccaatgcatct
atcacagtgaggaaaaatgttcagaactgtcttgcacttttggctagccggactggtagt
gaggtatctgaactgcttgagcctttataccaacctttgctgcagccacttataatgcgt
ccacttcgatcaaagacaattgatcaacaggttggaactgtgacagctctgaatttttgt
ttagcattgaggcccccccttctaaaagtgactccactgggatcagcagcgggtgctcat
cctagacaaagccagcggacagattcagattctgcagtaacttcttctcgtcaaactgct
gatgttggggtagtcatatctaatataaagtcggtcttggaacttattgatgaaagggtt
atgcttttagcggattgcaaaagacctgtgactcaaatattgaacacgttgctttcagaa
aaggggactgattctagtgtgcttatctgcgtgctagacatgttaaaaaggtgggctgag
gatgatttcgggaaaacaagtttatcggggtcctctggtgcatttcttacccagaaagat
atagtttctttcctccagaagcttgcacaggttgataagcagcacttctcatctgttgct
ttggatgagtgggataaggcgtatctccagcttttatatggactttgtgccgattcaacg
aagtatccgttggcactccgacaagagatctctctgaaagttgagagacattccatgctt
ggtttacgggcaagggatcctgatatgcgaaggaagttcttcttgttataccatgagtct
ctcggaaaaaatttatttgcacggttgcagtatattattcaaaaccaagattgggaagct
atgggtgatgttttttggctcaaacagggtcttgatctcctcctagccattttaattgag
gagaagcccattacgctagcaccgaattctgccagggtagtaccacttttgtcatcacaa
aatcctggaacacattaccaaccacctgctatgccagagggacctgaagaagttggctca
atgtttgatagcattgtaatgaagcatgcacaatttcttagtgcggcaagcaaacttcag
gtcgctgatgttgttatccctttaagggagcttgctcacacagatgccaatgttgcttac
catttgtgggtgctagtatttccaattgtgtgggcaactctacacaaggaagagcagaaa
gctttagctaagcctatgatttctctactttcgaaggactaccacaagaagcagcaaggg
cacagaccaaatgttgttcaagcacttctggaagggcttcagttgagccatcctcaacct
aggatgcctagtgagcttatcaaatatataggaaaaacgtacaatgcatggcatcttgca
ttgactttgttagagactcatgtcatgctgttcacgaatgaatcaagatgtgctgagtct
cttgctgagctttatcgtttgttaaacgaagatgacaggagatttggattgtggaagaat
aggtccaacaccaccgaatcgagagctgggctttcaatggttcaacatggattttggcaa
cgtgctcagagcctattttatcaggcaatggttaaggcaacccaaggcacttacaataac
acagtacctaaggccgaaatgtgcctgtgggaggagcaatggctccactgtgccactcaa
cttggtcagtgggatgccctggtagattttggaaaaagcaccgagaattatgaaattttg
cttgatagtctttggaaagctccagattgggcatacttgaaagatcatgtgatacccaaa
gcacaagtggaagagacgccgaagcttcgtttggttcaagcttgttttgcccttcatgaa
aaaaatgcaaacggtgtaggagatgctgaaaacatagttgggaaaggcgttgatcttgct
ttggaacagtggtggcagttaccggaaatgtctcttcatgctagggtgcctctactgcag
caattccaacaactagtggaggtgcaagagtcttctagaatttatgttgacatcacaaat
gggagtaaagttcctggaaatgctgctgttgggggacagggaaatcattatgcagatctg
aaagacattcttgagacttggaggctaagaactccaaatgaatgggataatatgaccatc
tggtatgatatgctgcagtggaggaatgagatgtataatgttgttattgatgcatttaag
gactttataacttcaaatactcaacttcatcaccttggttatcgtgacaaagcatggaac
gtcaataagcttgctaggatagctcggaaacaagggctttatgatgttagcgttcagata
cttgaaaaaatgtatgggcactcacaaatggaagtacaggaagcctttgttaaaattaaa
gagcaggcaaaagctcatctggaaacgaaaggagagctcgctactggtcttaatctggtt
aatagcacaaatttggagttctttctagcgaagaacaaggcagaaatttttcgactaaag
ggggattttcatttgaagctaaacgacactgaaggtgctaatattgcatattccaacgca
atcaccctattcaaaaatttacccaaaggatggataagctggggaaattactgtgagatg
gcataccaagaaacacaagaggaaatctggctggaatatgccgttagctgctttcttcag
ggtataagatttggagtttccaattccagaagtcacatggctcgtgttctttatcttctt
agtttcgatacagcaaatgagcatgttggtagaacatttgataaacacttggaccaagta
cctcactgggtgtggctttcttggatcccacagctgttgctttccttgcagcgtacagaa
gcaccccattgcaaattagttctaatgaaaattgctgcagtattcccgcaggctctctat
tactggcttcgcacctacttactagaacgccgtgatgcagtaaataaatctgaacttagc
agaattgttttggctcaaagaatgcagcagaatgttcctggtgttagtgcggttcatggt
ggaggcaatttaccatcagaaactcaaatccatcaaggtgctcaaacaagtggggctgtt
ggaaccacccgtgataatggtaacccacatgcgcaagaaagtgaacgtgccgctatggaa
aacaatgttaattcagggaatgatcagcctatgaaccaaagcagttcaactatcaatgaa
aatagtcaacacgcagtaatacgggatggtgcttccttggcaatgtctgctgctggtgct
tttgatgctgcaaaggatattatggaagctcttaggagtaaacataacaacttggccagt
gaacttgaggttcttctcacggaaataggttcgaggtttgttaccctaccggaagaaaga
cttcttgcggttgtgaatgctttgttgcatcgatgttacaaatatccaactgccaccact
gccgaagttccccaaccgctcaagaaagaactctcgggtgtatgcagagcttgtttttct
gcagatgctgtgaccaagcatgtcgcatttgtgagagaatacaaacaggatttcgacttc
aatgttgttgatgtggagataccaggacagtactttgctgaccaggaagtcgcacctgat
catacagtaaagttggatagggttggagcagacatacaaattgtacgaaggcatgggagc
agctgcagacgtttgactcttattggctccgatggctcacaaaagcattttattgttcaa
acatcattaactcctaatgcgaggagtgatgaacgaatcttgcaggttttccgtgtgatg
aatcaaatgtttgacaagcataaagaatcgagaagacgccatataggacttcacactccg
atcataatccctgtctggtctcaggtccgaatggttgaggatgatctcatgtacaacact
ttccttgaggtatatgagaatcactgtgaaaggaatggtcgagagtcagatcatcctatt
acctacttcaaggagaaactcaatcaagctatctcagggcaaatctcgccagaagcaatt
ggagatcttcggctacaggcttatggtgaaatcacaaagaacatagtcaatgacaccatc
ttctctcagtacatgtacaagacatcaatgagcggaagtcatctttgggctttcaagaag
caattcgctgtccagctagctgtatccaatttcatgtccttcattctacaaattggtgga
agatccccaaacaagatcttgttcgccaaaaatacggggaaaatgttccagacagatttt
catccatcgtacgactccaatgggatggtcgagctcaacgaacctgtccctttccgcctc
acaagaaacatgcaagcattcctatcgcattttggtgtcgaaggtcctctcatgtcaaac
atgtgttctgcatctcaagcagttttctcctccaagcaaaacgaacatcttcggtatcaa
ttagccatgttctttcgcgatgagcttctatcatggtttggaagaagacctcttggggtg
cctattcctcctgttacaggaattgctactttgagttcggccgagctgaagcacaaagtt
aacttaaacgttgacgatgtcattggacgaatcagaggaatagcgccacagtatttctgt
gaagaggatgagaactcggtggagccgccacagtctgtacaaagaggtgtgaatgaattg
gtggaggcagctttgtcgcctcgcaatctatgtatgatggatccaacatggcatccgtgg
ttctaa
DBGET
integrated database retrieval system
