Camelina sativa (false flax): 104727558
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Entry
104727558 CDS
T05044
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104727558
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104727558
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Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
104727558
NCBI-ProteinID:
XP_019087279
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Position
11:complement(2512250..2514483)
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AA seq
405 aa
AA seq
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MDFHHRHFTMETTLRIWILINFLCFVLVNGQNYNVLNYGTKGDGQTDDSEGFVQAWNDVC
GGDGDIKTLLIPSDKTFLLQPTVFQGPCNSTSIKVQLDGVIVAPSDKGAWSNPTPKMWIK
FSYVSGLMIVGSGTINGRGLTFWELNLKASQRPTALHISKCDNFRINGLTSIDSAKNHIS
INKCNTVAISNINLFAPETSPNTDGIDISESTNINIFDSTIQTGDDCIAINSGSSNINIT
GINCGPGHGISVGSLGAGGAEATVSNVQVTHCTFNQTTNGARIKTWLGGQGYARNISFTD
ITLINTKNPIIIDQQYIDKGRLVGEESAVAISNVKYIDFHGTTSNKNAITIKCSETTHCR
DVVMDGINITMADGGKPKVNCQYVDGESSDNDLMRNCFNNNTSTN
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggattttcatcatcgccatttcacgatggaaaccacattacgtatttggatcttgata
aatttcttatgttttgtcctcgtaaacggtcaaaattacaacgtactcaattacggtact
aaaggagatggtcaaactgatgattcagagggttttgtgcaagcatggaatgatgtatgt
ggtggagacggagacatcaaaacacttcttattccttcagacaaaacatttttacttcaa
cctacggtgttccaaggtccatgtaattctacttctataaaagttcagttggatggagtt
atcgtagcacctagcgacaaaggagcctggtccaatcccacccctaaaatgtggatcaaa
ttttcatatgtgtctggtctaatgatcgttggttcaggaacgattaatggtcgtggttta
actttttgggagttaaatttgaaagcttctcaacgacctaccgcattacatattagtaaa
tgtgataactttaggataaatgggctaacctcgattgatagtgcaaaaaaccatatatca
atcaacaaatgcaacactgttgcaatatcgaacataaatctttttgcacctgagacaagt
cccaatacagatggaattgatataagtgaatcaactaatatcaacatatttgactctaca
attcaaacgggggatgattgtatagcaatcaacagtggaagttctaatatcaacatcaca
ggaattaattgtggaccaggtcatggaataagtgtaggaagtctaggagccggtggagca
gaggctacagttagtaatgtacaagtgactcattgcactttcaatcagacgacgaatgga
gctagaatcaaaacatggctgggtggacaaggatatgcaagaaacataagttttaccgat
atcacactcattaacacaaaaaatccaattataattgaccaacaatatatagataaagga
cgtcttgttggcgaggaatcagcagtggcgattagcaatgtaaagtatatcgattttcac
gggacaacatcgaataaaaatgctataacgattaagtgtagtgaaaccacacattgtaga
gacgtcgttatggatggaattaatattaccatggcggatggaggaaaacctaaagttaat
tgccaatatgttgatggggagtctagtgataatgatttaatgcgcaactgctttaataat
aacactagtactaattag
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