Camelina sativa (false flax): 104727617
Help
Entry
104727617 CDS
T05044
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104727617
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104727617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
EAD10
Motif
Other DBs
NCBI-GeneID:
104727617
NCBI-ProteinID:
XP_010445009
LinkDB
All DBs
Position
11:complement(4446368..4450821)
Genome browser
AA seq
438 aa
AA seq
DB search
MYIGFKILLLVILIASYHLQQGDSHVILSIKDFFNDSHSTNVDHSKAFQDAWKALCGGSG
RGRELSLIIHARETYTIQPQLFEGPCVSPHIHIQIDGTIEAPRMVKDWGSKKTECWLCFG
RVTGLVLNGSGVLNSHGESWWSSVGVSSRPAAVRFSGCQNILYKGLTQINSPKNHISITS
CTNTTLSNIHLIAPLTSPNTDGIDISSSHNIQILSSSIKTGDDCIAIQGGSYDINITSVT
CGPGHGISIGSLGKGGTSDIVQNVNVRHCTFTGTQNGARIKTWLGGQGSVKNILYEDITM
INARFPIIIDQHYDGRKQSVGATAVKVSGVTYKYFKGTVVADVAAIKLDCDQKSGCDNIV
MDNINITSSSPRTPLTSYCKFAHVISRFVSIPIKCDYHVNVQPPSAKPYAEPPAPIAISA
TPYAELPTALNLTPHDTA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtatattggctttaagatactactcttagtgattctaatcgcatcgtatcatttgcaa
caaggagatagtcatgtgattctatccattaaagattttttcaatgattctcactctaca
aatgttgatcactctaaggcatttcaagatgcgtggaaagcgttatgtggaggcagtggg
agaggtcgggaactctctttaatcatacatgctagggaaacatataccatacaaccacaa
ttgtttgaaggtccttgtgtatctccacatattcatattcagattgatggaacgattgaa
gcgccgagaatggtaaaagactggggaagtaaaaaaacagagtgttggttatgtttcgga
agggtgacaggtctcgttctcaatggatctggtgttctcaattcccatggggaaagctgg
tggtcttctgttggcgtatcctcccgaccagcggcagtgagattttctgggtgccaaaac
attttatataaaggattaactcaaatcaatagtccaaagaatcacatatcaattactagt
tgcaccaacacaactttatcaaatattcatttgattgcacctttaaccagtccaaatact
gatggtattgatatctctagctcacacaatatccaaattctcagttcatcaatcaaaacc
ggtgatgattgtattgcaattcaaggtggttcatacgatatcaacataacttctgtgaca
tgtggtccgggtcacggcataagtatcggaagtctggggaaaggaggaacaagtgacata
gtacaaaacgtgaatgtaagacattgtaccttcactggaactcaaaatggtgcaagaatc
aagacatggcttggaggacaaggatctgttaaaaatattttgtacgaagatattactatg
ataaatgccagattccccatcatcatcgatcaacattatgacggtcggaaacaatcagta
ggggcaacggcggtgaaagtgagtggcgtgacatataaatactttaaagggacagttgtt
gccgatgttgctgcaataaaactagattgtgaccaaaaatcaggttgtgataacattgtc
atggataacatcaacatcacttcttcatctccaagaacgcctctcacctcgtattgcaaa
tttgcgcatgtaattagtcgctttgtctccattcccatcaaatgtgattatcatgtcaat
gtgcaacctccatcagccaaaccatatgctgaacctccggcaccgattgctatatccgcg
acaccatatgctgaacttccgactgctctaaatctgacaccgcatgacactgcatga
DBGET
integrated database retrieval system
