Camelina sativa (false flax): 104727878
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Entry
104727878 CDS
T05044
Name
(RefSeq) DNA damage-binding protein 1b-like
KO
K10610
DNA damage-binding protein 1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03420
Nucleotide excision repair
csat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104727878
09124 Replication and repair
03420 Nucleotide excision repair
104727878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104727878
03400 DNA repair and recombination proteins [BR:
csat03400
]
104727878
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
104727878
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
104727878
TCR (transcription coupled repair) factors
Cul4-CSA complex
104727878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
104727878
NCBI-ProteinID:
XP_010445239
LinkDB
All DBs
Position
11:11776774..11786765
Genome browser
AA seq
969 aa
AA seq
DB search
MELFRPHGEAQDFLFIATERYKFCVLQWDYESSELITRAMGDVSDRIGRPTDNGQIGIID
PDCRVIGLHLYDGLFKVIPFDNKGQLNEAFNIRLEELQVLDIKFLYGCVKPTIAVLYQDN
KDARHLKTYEISLKDKEFVEGPWSQNNLDNGADLLIPVPSPLCGVLIIGEETIVYCSANA
FKAIPIRPSITKAYGRVDLDGSRYLLGDHAGLIHLLVITHEKEKVTGLKIELLGETSIAS
SISYLDNAVVFVGSSYGDSQLIKLNMQPDAKGSYVEILEKYVNLGPIVDFCVVDLERQGQ
GQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSFISE
TRILAMNIEDELEETEIEGFSSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELRNKWD
APAGFAVNVATANASQVLLATGGGHLVYLEIGDGTLTEVKHVLLEYEVSCLDINPIGDNP
NHSQLAAVGMWTDISVRIFVLPDLTLVTKEQLGGEIIPRSVLLCSFEGISYLLCALGDGH
LLSFQLDTSSGKLRDRKKVSLGTQPITLRTFSSKSATHVFAASDRPAVIYSNNKKLLYSN
VNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTIDAIQKLHIRTIPIGEHARRICHQEQT
RTFAICCLRNQPSAEESEMHFGRILVFIVEEGRLQLITEKETKGAVYSLNAFNGKLLAAI
NQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
AIEERARDYNANWMSAVEILDDDIYLGADNCFNLFTVKKNNEGATDEERARMEVVGEYHI
GEFVNRFRHGSLVMRLPDSEIGQIQTVIFGTVSGMIGVLASLPQEQYAFLEKLQTSLRKV
IKGVGGLSHEQWRSFNNEKRTAEAKSYLDGDLIESFLDLSRGKMEEVSKGMDVQVEELCK
RVEELTRLH
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggaattgttccgtccccatggtgaagcacaagattttttgttcattgcaactgagaga
tataaattctgtgttcttcaatgggattatgagtcatctgagctaattacaagggcaatg
ggggatgtttctgatcggataggccgaccgacagacaatggtcagattggtataattgat
cctgattgcagagtaattggtctccatctgtatgacggcttgttcaaggttattccgttt
gacaataaaggacagctcaatgaagcttttaacataaggctggaggagttgcaggtccta
gatatcaagtttttgtatggatgcgtgaagcctacaattgcagtactttatcaggacaac
aaagatgctcgtcatctcaaaacatatgaaatttctcttaaagataaggaatttgttgaa
gggccatggtcacagaacaatctcgacaatggtgctgacttattaatccctgtaccttca
cctctgtgtggcgtccttatcattggagaagaaaccattgtctattgtagtgccaatgca
ttcaaagcaataccaatacgaccttccatcacaaaagcatatggaagagttgatcttgat
ggttctaggtatctccttggtgaccatgctggactgattcacctgcttgttataacccac
gagaaagaaaaggtcactggcctcaaaattgagcttttgggtgaaacatctatagcatct
tccatctcgtatcttgacaatgctgttgtctttgtcggttcaagttatggagattcacag
cttattaagctaaacatgcaaccggatgcaaaaggttcatatgtagaaattttagaaaag
tatgtcaacttggggcctattgtcgacttttgtgtagttgatcttgagagacaagggcaa
ggtcaggttgtaacatgctctggagcatataaggatggttctcttcgcatagtccgcaat
gggataggaataaatgaacaggcgtccgtggaacttcaaggcatcaaaggaatgtggtcg
ttgaaatcgtcaattgatgaagcatttgatacattccttgtagttagttttatcagcgaa
actcgtatattagccatgaatatagaggatgaactggaagaaacagagattgagggtttc
tcgtctcaagtgcagactttattttgccatgatgctgtctacaaccaacttgtacaggtt
acctcaaattctgtcagattagtcagttctacaactagagaattgcgaaataaatgggat
gcaccagctggattcgctgttaatgttgcaactgcaaatgcgagccaggttcttttggcc
actggaggtgggcatttggtctacctagaaattggggacgggacattgacggaagttaaa
catgtcctgttggagtacgaggtttcttgtcttgacataaaccccattggcgataatcct
aatcacagtcagctagctgcagtcgggatgtggacagatataagtgtgaggatttttgtg
ctgccagacttgactcttgttactaaggagcaactaggaggggagataattccccgatct
gttcttctttgttcatttgaagggatatcttacttgctctgtgctcttggagatggtcat
ctcttaagttttcagttggatacgagtagtgggaaattaagagatcgaaaaaaagtatca
ctggggactcagcctataactttgcgtactttttcatctaaaagtgcaacacatgtgttt
gctgcatcagatagaccagcggttatatatagcaacaacaagaagctgttatacagcaac
gtgaatctaaaagaagttagtcatatgtgtcccttcaactctgctgcttttccagacagt
ctagcaattgccagggaaggcgaacttacaattggcaccatcgatgccattcagaaactt
cacatacgcactattcccattggagagcatgctcgtcgtatctgccatcaggaacaaaca
cgaacatttgctatctgctgtttgagaaaccaaccaagtgcggaagaatctgaaatgcat
tttggaaggatacttgtctttatagttgaagaagggagattgcagcttatcacagagaag
gaaaccaagggagctgtttattctctcaatgccttcaatggaaaacttcttgctgctatt
aatcaaaaaattcagttgtacaagtggatgctgcgggatgatggcactcgcgagctgcag
tctgaatgtggacatcacggtcacatactagctctctacgtacagacccgtggagacttc
atcgtcgttggtgacctcatgaaatcaatctctttattaatttacaagcacgaggaaggt
gcaatcgaggaaagagctcgtgattataatgcaaactggatgtcggcagttgagatactc
gatgatgatatctaccttggtgctgataattgcttcaacctattcacagtaaagaagaac
aatgaaggtgctacggatgaagaaagggctcgtatggaggtggtaggcgagtatcacatt
ggggaatttgtgaaccgattccgccatgggtcgcttgtaatgaggctgcctgattcagag
attggtcagatacagactgtcatatttggcacagtgagtgggatgataggagtgctagct
tctctgcctcaagaacagtatgcgtttctagagaaactgcagacgagtctgaggaaagtg
ataaaaggagttggtggtctaagccacgagcagtggagatcattcaacaacgagaaaaga
acagcggaagcgaagagttacttggatggagatctcattgaatccttcttggatctgagc
aggggtaagatggaggaggtctctaaaggtatggatgttcaagtggaagagttgtgcaag
agagttgaggaactcactaggcttcactga
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