Camelina sativa (false flax): 104728297
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Entry
104728297 CDS
T05044
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104728297
Spliceosome [BR:
csat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104728297
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
zf-C4H2
Motif
Other DBs
NCBI-GeneID:
104728297
NCBI-ProteinID:
XP_010445601
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All DBs
Position
2:complement(17780010..17783697)
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AA seq
429 aa
AA seq
DB search
MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGTVVNTKCNVGANRNQAFI
EFEDLNQAIQMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVVGNVLLVTIEGD
DARMVSIDVLHVVFSAFGFVHKITTFEKTAGYQALVQFSDAETATSSKNALDGRSIPRYL
LPEQVGQCSLKITYSAHTDLTVKFQSHRSRDYTNMYLPVAPSAIDSTGQVIVGVDGKKME
PESNVLLASIENMQYAVTLDVLHMVFAAFGEVQKIAMFDKNGGLQALIQYQDVQTAMVAK
EALEGHCIYDGGFCKLHITYSRHTDLSIKVNNDRSRDYTMPNPPVPMPQQPSQNPYAGNP
QQYHAAGGSHHQQQQQQQPPPQGGWGQGSMGMGGGHNPYMAPPSSGPMHQGPPGGHMPPQ
HYGGPGPMH
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgtttcgagccagccacagtttcgttacacgcaacctccttctaaggttctt
catttgagaaacttgccttgggaatgtactgaagaggagttaattgaactggggaagcct
tttggtacagttgttaataccaagtgtaatgttggagctaatcggaatcaagcttttatt
gagtttgaagatttgaatcaagctatacaaatgatttcttactatgcttcttcttccgag
cctgctcaagttcgaggtaaaactgtctacctccagtactccaacaggcaagagatagtg
aataacaaaacgacagcagatgttgtggggaatgttcttctagtgacaattgaaggagac
gatgctcgtatggtcagcattgatgtcttgcatgtggtattctcagcatttgggttcgtt
cacaagattactactttcgagaagacagctggataccaggcactggttcaattttctgat
gcggaaactgcaacctcttcaaaaaatgccctcgatggaagaagcatccctaggtatcta
ctccctgagcaagtgggacaatgctctctcaaaatcacatattcagctcatacagatctg
actgtcaaatttcagagtcatcggagtagggactatactaatatgtaccttcccgttgct
ccatcagccattgatagtactggtcaggtgattgtgggtgtagacgggaagaagatggag
ccagaaagtaatgttcttctcgcatccattgaaaacatgcagtatgcagtaaccttggac
gttttacacatggtttttgcggcttttggggaagttcaaaagattgcaatgtttgacaag
aatggtggcctacaggcattgattcaataccaagatgttcaaacggctatggtggctaag
gaagcattggaaggacattgtatttacgacggtggattttgtaagctccacattacttat
tcacgccacacggacctcagcataaaggtgaacaacgatagaagcagagactacacaatg
cccaacccgccagttccaatgcctcaacaacccagtcagaatccatacgccggcaatcca
cagcaataccacgcagcaggtgggagccaccaccaacagcagcagcagcagcagccgccg
ccacaaggcggatgggggcaaggttcaatgggaatgggtggtggtcacaatccttacatg
gcaccaccgtcttctggcccaatgcatcaaggtcctccaggtggtcatatgcctccacag
cattacggtggtccgggtccaatgcattaa
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