Camelina sativa (false flax): 104728492
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Entry
104728492 CDS
T05044
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104728492
Membrane trafficking [BR:
csat04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
104728492
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
104728492
NCBI-ProteinID:
XP_019087542
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All DBs
Position
11:complement(29606149..29610719)
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AA seq
892 aa
AA seq
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MASASQFLLEDQTDEDFFDKLVDDAFSPTQAQASSSASELKFDYGSDSDDTRAFSNLSIA
KDPVADGVDTLNEGASSSLGIDDDPSSTALEPVQFVNSDARDDEMRSEVAEIPLSDSAKE
SKLVNEPGIPGVKELDWGSFDADLSVNDGRGFGSYSDFFTELDATAGSLQGKAQVAVATG
GNLVFNDTMNTRDGLDNSPGSDQHQGQVHHDSASGQYVDNSQSWENLYPGWKYDESTGQW
YQVDGHDASMNSQEGYEISTTSNWDNISANNLDVAYQRQSTTSAVAGTVENVSTWNQVSQ
VNNGYPEHMVFDSQYPGWYYDTIAQEWRSLDSYNQAFQTTGQANDQHVQNGNSLAAMYHN
RESNVHDVYDKKQTLRTQEFDIQSQHGNWDQSYYANNQQTTNTWQSENAGNAEAAVTSAS
LSNFGGNQQVNNLYSTGSVAEQLKPNEIGVESFIPQHTNLASVTQNGPMSFSNDFYSRQN
SVNNASQSFQNNQLFSPSAGRSSDGRPPHALVNFGFGGKLIVMKDDSGSLQSSSFGSQNG
TGGSYISVLNLAEIITGSASYSTLGENSLSYFNCLDQQSIPGPLVGGNAGSKDLHKWLDE
KILNCESSNMDFSRGKLLKMLLSLLRISCQYYGKLRSPFGTDASQKETDSAEAAVAKLFA
NAKKDGVQNGYGPISQCLQHLPPESQMQVIASEVQTLLASGRKMEALQCAQEGHLWGPAL
VIAAQLGQQFYVDTVKQMALRQLVPGSPLRTLCLLVAGQPAEVFSTGSTSDLSFPGSINV
HPQQPQFGSTSMLDSWEENLGIITANRTTDDELVITHLGDCMWKERGEIIAAHICYLIAD
KNFDPYSESARLCLVGADHWKYPRTYASPEAIQRTELYEYSKTLIPKQLIGL
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggcttctcagttcctgctggaggatcaaacggatgaggatttcttcgacaag
cttgttgatgatgccttttctcccacccaagctcaggcttcatcctctgcctcagagctg
aaattcgactacggaagtgactccgatgacaccagagctttttctaatctctccattgcc
aaagatcctgtggctgatggagttgacacattgaatgagggcgcaagtagttccctggga
atagacgacgatccttcctccactgccctggaacctgttcaatttgtcaacagtgatgca
agagatgatgaaatgagatcagaggtagctgagattccactatctgattcagcaaaagaa
agcaagctagttaatgagcccgggattcctggggttaaggagcttgattggggttcgttt
gatgccgatttatctgttaatgacggtcgtggttttggttcatactctgatttcttcact
gagttggatgcaactgcaggaagtttacagggaaaggcacaagttgctgtggccaccggg
ggaaacttggtatttaatgatacaatgaacacaagagatggtttagataattccccaggt
tctgaccaacatcagggtcaagtgcatcacgattctgcaagtgggcagtacgtggataat
agtcaatcttgggaaaatctctatcctggatggaaatatgatgaaagtactggccaatgg
tatcaagttgatggtcatgatgcaagcatgaattcacaggagggctatgaaatctcaaca
acgagtaactgggataacatttctgctaataacttggatgttgcttatcagagacagagt
acaacttccgcagtggctggcacagttgagaatgtgtctacttggaaccaggtttcacaa
gtgaacaatgggtatccggaacacatggtctttgactcccaatatccgggatggtactat
gacacaattgctcaagaatggcgctctctggacagctacaaccaggcttttcaaactact
ggtcaagctaatgatcagcatgttcagaatggcaattctcttgcagctatgtaccataat
agagagagtaacgtacatgatgtttacgataaaaagcagacactcagaacgcaagaattt
gatatccagagccaacatggaaattgggatcaatcgtactatgccaacaatcagcagact
acaaacacttggcaatcagaaaatgcaggtaacgccgaggcggctgtaacttctgcatca
ttatcaaacttcggagggaaccagcaagtaaataatttgtacagtacaggatctgtggct
gaacagttaaagccaaatgagattggcgttgagagcttcatccctcagcatacgaatttg
gctagtgtcacgcagaatggacctatgagtttctcgaatgatttctatagtagacagaat
tctgtaaataatgcttcacaatcattccagaacaatcagcttttctccccaagtgcagga
agatcatctgatgggcgtccaccacatgcacttgtcaattttggatttggaggaaagctt
attgttatgaaggatgacagtggttctctccagagttcatcatttggaagtcagaatgga
actggaggaagctatatctctgtcttaaacttggcagaaattattactgggagtgcctct
tattcaactctcggggaaaactctttgagctacttcaattgtctggatcaacaatctatt
ccaggtcccttggtaggaggaaatgctggaagtaaagacttacataagtggcttgatgag
aaaattttgaattgtgaatcttccaacatggatttttcaagagggaaacttttaaagatg
ctcctttctttgctaagaatatcttgtcagtattatgggaaactccggtctccttttggt
actgatgcatcgcaaaaggaaacggactctgctgaagctgccgtagctaaactttttgca
aatgccaagaaagatggtgtacaaaatggttatggtcctattagccaatgcttacagcat
ttaccacctgaatcacaaatgcaagtaattgcttcagaggttcagactcttctggcttct
ggtaggaagatggaggctctccagtgtgcacaagaaggtcatttatggggaccagcactt
gttatcgcggcacaacttgggcaacagttctatgttgacactgtgaaacaaatggccctt
cgtcagctggttcccgggtcacctttacgaacattatgcctgctggttgcagggcaacca
gctgaagttttctcaactggaagtacaagtgatctctcttttcctggttccataaatgtg
catccacagcaacctcagtttggaagtactagcatgcttgacagttgggaagaaaacttg
ggtataataactgctaacagaacaacagatgatgagcttgtcattactcatcttggagat
tgcatgtggaaagaaaggggcgagataattgcggcgcatatttgttatttaattgcggat
aagaactttgatccatactctgaaagcgccagactctgccttgttggagcggatcactgg
aaatatcctcgaacatatgcaagtccagaggctatacagagaacagagttatatgaatac
tctaagacgctcattccaaaacaactcatcgggttatga
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