Camelina sativa (false flax): 104729079
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Entry
104729079 CDS
T05044
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
csat04141
Protein processing in endoplasmic reticulum
csat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104729079
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104729079
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104729079
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104729079
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104729079
03009 Ribosome biogenesis [BR:
csat03009
]
104729079
03110 Chaperones and folding catalysts [BR:
csat03110
]
104729079
04131 Membrane trafficking [BR:
csat04131
]
104729079
03051 Proteasome [BR:
csat03051
]
104729079
03029 Mitochondrial biogenesis [BR:
csat03029
]
104729079
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104729079
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
104729079
Spliceosome [BR:
csat03041
]
Complex B
Other components
Prp19 complex
104729079
Complex C
Prp19-CDC5 complex
104729079
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
104729079
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP70 / DNAK
104729079
Membrane trafficking [BR:
csat04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
104729079
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
104729079
Proteasome [BR:
csat03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
104729079
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
104729079
Exosome [BR:
csat04147
]
Exosomal proteins
Proteins found in most exosomes
104729079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DACNG
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
104729079
NCBI-ProteinID:
XP_010446275
LinkDB
All DBs
Position
11:48743947..48747345
Genome browser
AA seq
632 aa
AA seq
DB search
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN
QVAMNPVNTVFDAKRLIGRRFSDASVQSDRKLWPFTVISSGTEISSMVLIKMREISEAYL
GTTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDKKATSVGEK
NVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKSKQDI
TGLARPLRRLRTACERAKRTLSSTAQTTIEIDSLYGGADLFAPITRARFEELNMDLFRKC
MEPVEKCLRDAKMDKSSVHEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGA
AVQGAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTLIQRNTTIPTKKEQVFSTYSD
NQPGVLIQVFEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDK
TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTI
RDEKISEKLPAADKKKIEDSIDEAIQWLDGNQLAEADEFEDKMKQLEGVCNPIIAKMYQG
AGGEAGGPGPHGMDEAAPPAPGGAGPKIEEVD
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggctggtaagggagaaggtcctgcgatcggtatcgatcttggtaccacctactcttgt
gttggagtgtggcaacacgaccgtgttgagatcattgctaatgatcaaggtaaccgaacc
acgccgtcttacgtcgctttcaccgacaccgagaggttgatcggagatgctgctaagaac
caggtcgccatgaaccctgttaacactgtcttcgatgcaaagaggttgattggtcgtaga
ttcagtgatgcatctgtccaaagcgacaggaagttgtggcctttcactgtcatctcttct
ggaactgagatctcttccatggttctcattaagatgcgtgagattagtgaagcttacctt
ggcactactatcaagaacgctgtggtcacagttccagcttacttcaatgactctcagcgt
caagctactaaggatgctggtgtcatcgctggtttgaatgttctgcgtatcatcaacgag
cccactgctgctgccattgcctacggtcttgacaagaaggccaccagcgttggagagaag
aacgttctgatctttgatcttggtggtggtacttttgatgtctctcttcttacaattgaa
gaaggtatctttgaggtcaaggccactgctggagacactcatcttggtggtgaagatttc
gataacagaatggttaaccactttgttcaagagtttaagaggaagagcaagcaggacatc
actggcctcgcaagaccccttaggaggctgagaacagcttgcgagagagcaaagagaact
ctttcttccacggcgcaaacgaccatcgagattgactctctctatggaggagctgacctc
tttgctccaattacccgtgctagattcgaagagcttaacatggatcttttcaggaagtgt
atggagcctgttgagaagtgtctccgtgatgctaagatggacaagagctcagtccatgaa
gttgttcttgtcggtggttccacccgtatccccaaagttcaacagcttctccaagatttc
ttcaatggtaaagagctctgcaagtctatcaaccctgacgaggctgttgcatacggtgca
gccgtccagggagctattctaagcggtgaaggaaacgaaaaggttcaagaccttctcttg
cttgatgtcactcctctctccctcggtcttgaaactgctggtggtgtcatgaccactttg
atccagagaaacacaaccatcccgaccaagaaggagcaggtcttctccacttactcagac
aatcagcccggcgtgttgatccaggtgttcgaaggtgagagagccagaaccaaggacaac
aaccttctcggtaaattcgagctctccggaatccctccggctcctcgtggtgtccctcag
atcactgtctgctttgacatcgatgctaatggtatcctcaacgtatctgctgaggacaag
accaccggacagaagaacaagatcaccatcacgaatgacaagggtcgtctctccaaggat
gagatcgagaagatggttcaagaggcagagaagtacaagtctgaggacgaggagcacaag
aagaaggttgaagccaagaatgctcttgagaactacgcttacaacatgcggaacaccatc
cgtgatgagaagatcagtgagaagcttccagctgcagacaagaagaagattgaggactcg
attgacgaagcaatccaatggcttgatggtaaccaattggctgaagctgacgagtttgaa
gacaagatgaagcagctggagggtgtttgtaatccgatcatcgccaagatgtaccaagga
gctggtggtgaagccggtggtccaggtccccatggtatggacgaagctgctcctcctgct
ccaggcggtgctggccctaagatcgaggaggtcgactaa
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