Camelina sativa (false flax): 104729151
Help
Entry
104729151 CDS
T05044
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like isoform X1
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00900
Terpenoid backbone biosynthesis
csat01100
Metabolic pathways
csat01110
Biosynthesis of secondary metabolites
Module
csat_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
104729151
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
csat01006
]
104729151
Enzymes [BR:
csat01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
104729151
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
104729151
2.5.1.29 geranylgeranyl diphosphate synthase
104729151
Prenyltransferases [BR:
csat01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
104729151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
104729151
NCBI-ProteinID:
XP_010446350
LinkDB
All DBs
Position
12:140942..143099
Genome browser
AA seq
320 aa
AA seq
DB search
MLFSASATPLVPSLCLLAAEKPVNRRPMMMRLSGGGAIGSSSSSSNFDLKTYWGTLMTEI
NQKLDEAIPVKYPAGIYESMRYSVLAQGAKRAPPVMCVAACELFGGDRLAAFPTACALEM
VHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSDIAILAGDALFPLAFQHIVSHTPPDLVP
RATILRVIAEIARTVGSTGMAAGQFVDLEGGPFPPSFVQEKKFGAMAECSAVCGGLLGGA
TDHELETLRRYGRAVGMLYQVVDDDKKTDGAIQMAQELKNKAKKELQLFDDDDDKYSEEL
VVPLHTFVDYAAHRHFLLPL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttagtgcttcagcgacaccactagtgcccagcttgtgtcttcttgcggcggag
aaacccgtcaatcgtcgtcctatgatgatgagactctcaggcggcggagcaattgggtct
tcttcatcgtcttcgaatttcgatctgaagacgtattggggaactctgatgacggagatc
aatcagaagctcgacgaggcgataccggtcaagtaccctgcggggatctacgagtcgatg
agatactcggtgctcgcacaaggcgccaagcgtgcccctccagtcatgtgtgttgccgcc
tgcgagcttttcggtggcgatcgcctcgccgctttcccaaccgcttgtgcccttgaaatg
gtccacgcggcttcgttgatacacgacgacctcccctgtatggacgatgatcctgtccgc
cgaggaaagccatcgaaccacacagtctacggctccgacatcgccattctcgccggcgac
gccctcttcccactcgccttccagcacattgtctcccacacccctcccgaccttgttccc
cgtgccaccatcctcagggtcatcgctgagattgcccgcaccgtcggctccactggtatg
gctgctggccagttcgtcgaccttgaaggtggcccctttcctccttctttcgttcaggag
aagaaattcggagccatggctgaatgctctgccgtttgcggaggtctcctcggcggtgcc
actgaccatgagcttgagactctccgaaggtacgggagagccgttgggatgctctatcag
gttgtggatgatgataagaagaccgatggagctatccaaatggctcaagagctcaagaat
aaggccaagaaggagcttcaactgtttgacgacgacgacgacaagtatagtgaagaactt
gttgttcctctacataccttcgttgactacgctgctcatcgtcattttcttcttcccctc
tga
DBGET
integrated database retrieval system
