Camelina sativa (false flax): 104729240
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Entry
104729240 CDS
T05044
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit, cytoplasmic
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104729240
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csat01007
]
104729240
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csat03016
]
104729240
Enzymes [BR:
csat01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
104729240
Amino acid related enzymes [BR:
csat01007
]
Aminoacyl-tRNA synthetase
Class II (U)
104729240
Transfer RNA biogenesis [BR:
csat03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
104729240
Prokaryotic type
104729240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD3
PheRS_DBD1
tRNA-synt_2
tRNA_synthFbeta
tRNA-synt_2b
PheRS_DBD2
DUF465
Motif
Other DBs
NCBI-GeneID:
104729240
NCBI-ProteinID:
XP_010446466
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Position
12:complement(537769..542105)
Genome browser
AA seq
485 aa
AA seq
DB search
MAEKAILGFLQNNEEITDSGLFSAEFNLDHDEVINVIKRLHGFRFIDVQDIKKETWVLTD
EGKKYAVEGSPEVQLFLAVPEEGSISKDELQKKLAPSVFSIGCSQAGKRRWVQMGMQVSR
RVQNVEDEVKDQLLQIQEGKEVDNDSISSLKARKLIIKETWTGYSVKKGPNYAPERKEVA
TDLTRENLQNWKELEFKEYNFNAKGAPLQAGHLHALLKVRKQFKDIFVQMGFEEMPTNNF
VESSFWNFDALFQPQQHPARDSHDTFFLNAPSTTRTLPEDYVERVKRVHESGGYGSRGYN
YDWKREEANKNLLRTHTTAVSSRMLYALAQKPFVPKKYFSIDRVFRNEAVDRTHLAEFHQ
IEGLICDRGLTLGDLIGVLKDFFSRLGMSKLRFKPAYNPYTEPSMEIFSYHEGLGKWVEI
GNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYGIDNIRDLFGHKVDLDLIKRNPV
CRIGI
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaggcgatactagggtttctgcagaacaacgaagagatcacggattcgggt
ctgttctctgccgaattcaacctcgaccacgacgaagtcatcaatgtcatcaaacgtctc
catggttttcgtttcattgatgttcaggacattaaaaaggagacatgggttctaactgat
gaagggaaaaaatatgcagtagaagggtcgccagaggtacaacttttcctagctgtgcct
gaagaaggtagcatatcaaaagatgaactccagaaaaagcttgctccttcagtcttcagt
atcggctgctcacaagccgggaaaagaaggtgggtgcaaatgggaatgcaagtctcgagg
agggttcaaaatgtagaagatgaagtgaaagaccagcttttacaaatacaagaagggaag
gaagttgacaacgacagtatcagttctcttaaagccagaaaactcataataaaagagaca
tggacggggtattccgtaaagaaaggtcctaactatgctcccgagagaaaggaagtagcc
actgatttgacacgagaaaatcttcaaaactggaaagagttagagtttaaggaatataac
ttcaatgctaaaggagcgcctcttcaggctgggcatcttcacgctcttctcaaggtgcgg
aagcagtttaaagacatatttgttcaaatggggttcgaggagatgccaacaaacaacttt
gtggagagcagcttctggaattttgatgcgttgttccagcctcagcagcaccctgctcgt
gattctcatgacaccttctttctaaatgcaccctctactacaaggacactgccggaagat
tatgttgagagggtgaaacgtgttcacgagtctggtggttatggatctagagggtataat
tatgattggaaacgagaagaagcaaacaagaatcttctccgtactcacacaacggctgtc
tcatctaggatgctttatgcactagcacagaaaccttttgtgcccaagaagtacttttct
attgaccgtgtcttcagaaacgaagctgttgatcggacccaccttgcagagttccatcaa
attgaaggtttgatttgtgatcgaggccttacactgggagacctgattggtgtattaaaa
gacttcttctcacgcttagggatgtcgaaactgcggttcaagccagcttacaacccttac
acagagccaagtatggaaattttcagctaccatgaaggcttagggaagtgggtggagatt
ggtaactctgggatgttcagacccgaaatgcttcttccaatgggtttacccgaggatgtt
agagtaattgcttggggtctttctcttgagagaccgacaatgatattatacggtattgac
aacatccgcgatttgtttggacacaaggtggatctcgatttaattaaacggaatccggtc
tgccgaattggaatttga
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