Camelina sativa (false flax): 104729300
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Entry
104729300 CDS
T05044
Name
(RefSeq) coatomer subunit alpha-1-like
KO
K05236
coatomer subunit alpha
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104729300
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104729300
Membrane trafficking [BR:
csat04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
104729300
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104729300
Exosomal proteins of bladder cancer cells
104729300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EML_2
WDR55
Beta-prop_EIPR1
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_SCAP
WD40_RFWD3
WD40_MABP1-WDR62_1st
NBCH_WD40
Gag_FV_central
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
104729300
NCBI-ProteinID:
XP_010446538
LinkDB
All DBs
Position
12:816699..822103
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AA seq
812 aa
AA seq
DB search
MKKVKMMIRSETKSSEDDDQGDKVVLGVSFHSKRPWILASLDRGGIELWDYRMVALIKRF
GKHQLPVRGVHFNNLRPLFVSGGDDFVVKVWNYDTGKCHLSLLGHEGSVRTVQFHPDSPW
ILSASEDKTIRIWDWKSGQSGQSLYLLNGHTDWVTCASFHPTTGSILSGSRDQTVRIWDQ
EKPFSGPFVSKVLTTHTKGVNSVSFHPTDRRLIVSCSDDQVKLLCLKTDGSLAGTRLKTE
DILETKHPLDDDTYTNASFQVNSSPIVSTTTRGRIRVWDPSVWDSRRNELDTFDLKHIFS
SLAVHPETNLIAAGHDSGFIVFKPDRQRPAFAVSGNFLTYVRGPGLFVYDFCAQRESQHP
ANHIVKIFSFNPERDAILASSNVDGASYEMYYYLQPTLTYLPATTNTVSAIFVSTDTFVV
LQKDPRMLLLKTLDGSMLSQISLPLITEATVDTIFYAGTGYLLCRSEEKLEMLDLQQSLV
VCEIQTPSVVRSVVWSSDMERVALLSKHTIMIASKSLVLQCTLHETNRVKSGAWDDGFGV
LIYTTLNHLKFCLPNGESGIIRTLDVPFYVTKVSRDLVYCLDRQVKLKIFRIVSSEYALK
VSLLRENFDHVKSMIRTSQLPGQAMVHYLQQKGFPEVAFPLAHDEKTRISLVIESGNIDA
AVTPARTLNEKDQWHKLAVGALRYGRVGVAKLAYKEAQNWQRLAFLHLLTGDLKNLESVV
EESNSFMLKFEHSLFVGDVASRVKVLEDAGHLPLAYIIASVHGLCDTAELLANKLGHNVP
SLPEGKKSSLPMPPAPILCEHDLPVLEKKFVS
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggtgaagatgatgatcaggtcggagacgaagagcagcgaagatgatgatcaa
ggcgacaaagttgtcctcggcgtgagtttccactccaagaggccttggattctcgcgagt
ctggacagaggcgggatcgagctgtgggattatcgtatggtggcgttgatcaaaaggttt
ggtaagcatcagttacctgttcgtggtgtgcacttcaacaacttaaggccgttgttcgtc
tccggaggtgatgatttcgtcgttaaggtctggaactacgacacaggcaagtgccatctc
tctcttctcgggcatgaaggttctgtccgcactgtccagttccaccccgattccccctgg
atcctgagtgctagtgaagataagactatccgcatatgggactggaaatcagggcaatca
gggcaatctctttatctcttgaatggtcacacggattgggttacctgcgcctcgtttcat
cctactaccggatccatcttgtcaggatctagagatcagactgtgcgtatttgggatcag
gagaaaccattttctgggccttttgttagcaaggtgcttactactcatactaaaggagtc
aactccgtttcttttcacccaaccgaccggcgtcttattgtctcttgttctgatgaccaa
gtaaagttgttgtgtcttaagacggatggaagtcttgcaggaacaagattgaagacagaa
gacatattggagacaaaacaccctttggatgacgacacttacacaaatgcctcctttcaa
gtaaattcttccccaattgtctccactactacacgagggaggatccgtgtgtgggatccc
agtgtctgggatagccgccgaaatgaacttgacactttcgaccttaaacacatattctcg
tcactagcagttcaccctgagacgaatctaattgccgcaggacatgacagtggtttcatc
gtcttcaaacctgatagacaacgtcctgcatttgctgtgagtggaaatttcttaacctat
gtcaggggtcctggtttgttcgtatatgatttctgcgcacagagagaatctcaacatcca
gcaaaccatattgtgaagatattttctttcaatccagaaagggatgcaattctcgcttcc
tcaaatgtggatggcgcttcttacgagatgtactactacctccaaccaacccttacatat
ctccctgcgacaaccaatacggtttctgctatctttgtttcaacagatacctttgtggtt
ctgcagaaagaccccagaatgcttctactcaagaccttggacggcagcatgctctctcag
atctctctcccactgatcactgaggctaccgttgatactatattctatgctgggactggg
tatttgctttgcagatctgaggagaaattagagatgttggacctgcagcaaagcctggtt
gtttgtgaaatccagactccatctgttgttagatccgttgtttggtccagtgatatggag
agggttgctttgctcagcaaacataccatcatgatcgcaagtaaaagtctcgtcctccag
tgcacccttcatgagactaatcgtgtgaaaagcggagcttgggacgatggctttggtgtc
ttgatctacacaactttaaaccacctcaaattctgtcttcctaatggcgagagtggaatc
atccgaaccctcgatgtccctttttatgtcaccaaagtctcacgagacttggtatattgc
ttggaccgccaagtgaagctcaagatttttagaattgtttcaagtgaatatgctctcaag
gtttcactcctcagggagaacttcgaccatgtcaagagtatgatccgtacctcccagctg
cccgggcaggctatggtccattatctccagcagaaaggattccctgaagttgcttttcct
ctagctcatgatgaaaagacccgaattagccttgttattgaaagtggcaacatagacgct
gctgttacaccagctagaactcttaatgagaaagatcagtggcacaaacttgctgtgggt
gctcttagatatggtagggtaggtgtggccaaacttgcttacaaggaggcacagaattgg
caaaggctggcctttctccatctcttaactggagacttgaagaacctggaatctgttgtg
gaggagagcaatagtttcatgttgaagtttgaacattcacttttcgtgggagatgtggca
tcgcgtgtcaaggtactagaggacgcagggcacttacctcttgcctatatcatagcttcg
gttcatggattatgcgatactgctgagcttttggcaaataagctgggacacaatgtgcct
tccttgcctgaaggtaaaaagtcttcccttcctatgcccccagcgcctatcttgtgtgaa
catgatttgcctgtcctggagaagaagtttgtgtcttag
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