Camelina sativa (false flax): 104729359
Help
Entry
104729359 CDS
T05044
Name
(RefSeq) uncharacterized protein LOC104729359
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104729359
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104729359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
RhgB_N
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
104729359
NCBI-ProteinID:
XP_010446599
LinkDB
All DBs
Position
12:1073774..1077729
Genome browser
AA seq
666 aa
AA seq
DB search
MASQKKIASLIICFLLLFLLPIAFSEPTRNLDGRSARAPTVQQIKKRHGTREVVVDNGII
RVSFSSPEGLVTGIKYKGIDNVLSPHLRARGYWDLMWQGENIRQGGLDRIEGTKFRIISQ
TQEQVEISFSRTWKRGDPHIPLNVDKRYIIRANTSGFYTYGIFERLPEWPELDMGLIRLV
FKLNPESFHYMVVADNRQREMPTEADRDIDHGHAKALGYKEAVQLTHPHNSKFKNQVDDK
YQYTCNIEDNKVHGWISTKSHVGFWIISPSGEYRSGGPIKQELTSHVGPTALTTFISGHY
VGADMKTHYVTGESWKKVLGPVFIYVNSDSSSNSPEDSLWEDAKRQTKKEVKAWPYDFVA
SSDFPTRRERGTVTGRLIVNDRFLTSGGSAYVGLAPPGEAGSWQTNTKGYQFWTKTNETG
HFTIDDVRPGTYNLYGWVPGFIGDFLYQNRVDVAAGSEISLDRVVYEPPRNGPTLWEIGV
PDRTAREYFVPEPYKNTMNPYLDQTDNFRQYGLWQRYTELYPNHDLVYTIGASNYSQDWF
YAHVTRKTGDLTYVPTTWQIVFQLPYVNWRGSYTLQLALASAARANLQVRINNENTWPFF
STGTIGKDNAIARHGIHGLYRLYSISVPGRLLRTGTNTIYLRQAKAIGPFEGLMYDYIRL
EEPSRD
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgcagaagaagatagcttccctaattatttgtttccttctgttgtttcttctt
cccatcgccttttctgagccgacaaggaacttagatggaagaagtgcaagagctccaaca
gtgcagcagataaagaaaagacatgggactcgagaggtggtagtggacaatgggattatc
agagtcagtttctcaagccctgaaggacttgtaactgggatcaaatacaaagggatcgac
aatgttctatcaccacatctacgagctcgagggtactgggacctcatgtggcaaggagaa
aacattcgccagggcggcttagatcgaatcgaaggaaccaaatttagaatcatcagtcaa
acccaagaacaagtggagatttcgttctctagaacatggaagcgtggtgatcctcatatt
ccattaaacgtagacaagaggtatatcatacgtgcaaatacttcaggattctacacatat
ggaatcttcgagagacttcccgagtggccagaactcgacatgggtttaattcgactcgtt
ttcaaactcaacccagagagctttcattacatggtggtggctgataaccggcaaagagaa
atgccaacggaggctgaccgtgacatcgatcatggccatgccaaggctcttggttataaa
gaggctgtacaattgactcatcctcataactccaagttcaaaaaccaggtcgatgacaag
taccaatacacatgtaatatcgaagacaacaaggtacacggttggatctcaaccaagtcc
catgttggcttttggatcatctcaccaagcggcgaatatcgctccggtggaccaatcaaa
caagagctcacgtctcacgtcggtccgacggccctcacgacttttataagcggtcattat
gttggtgcggacatgaagacacattacgtaactggtgaatcgtggaaaaaggtcttgggt
cctgttttcatctacgtcaactctgactctagcagcaatagtcctgaagattcattatgg
gaagatgccaaacgacagaccaaaaaagaagtcaaagcctggccgtatgattttgtagca
tcctctgactttcctactcgtcgagaaagaggaaccgtcaccggtcgtctcatagtcaac
gacagattcttgacgtcgggaggatctgcatatgtcggtttagcacccccgggagaagct
ggttcgtggcaaacaaatactaagggatatcaattttggacaaagactaacgaaacaggt
cacttcacgatagatgacgtcagaccgggaacatacaatctgtatggatgggttcctggt
tttatcggggactttctataccaaaaccgtgttgacgtagctgcagggtcagagattagt
ctagatagagttgtgtacgagccacctaggaacggtccaacgttatgggagattggtgta
ccagatcgaaccgctcgagaatactttgtaccagagccatacaagaacacaatgaaccca
tacctagaccaaactgacaattttaggcagtacggattgtggcaacgatacacagagttg
tatccaaatcacgatctcgtctacacaattggagctagtaactatagccaagactggttc
tacgctcatgtcacaaggaaaaccggtgatttaacatacgtgccaacaacatggcagatc
gtgtttcagcttccatacgtaaactggcgaggcagctacacattgcagctagctttagcc
tcggccgcacgggctaatttacaagttcggatcaataacgaaaacacgtggccgtttttc
tcaactggtactattggaaaagacaatgctatagcaagacatggaatccatggactctac
aggctttatagcatcagtgtccctggaaggttgctaagaaccgggaccaacacgatttat
cttcgacaagctaaagcaataggaccatttgaaggtcttatgtatgattacattcgtcta
gaagagccttctagagattag
DBGET
integrated database retrieval system
