Camelina sativa (false flax): 104729497
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Entry
104729497 CDS
T05044
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00900
Terpenoid backbone biosynthesis
csat01100
Metabolic pathways
csat01110
Biosynthesis of secondary metabolites
Module
csat_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
104729497
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
csat01006
]
104729497
Enzymes [BR:
csat01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
104729497
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
104729497
2.5.1.29 geranylgeranyl diphosphate synthase
104729497
Prenyltransferases [BR:
csat01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
104729497
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
104729497
NCBI-ProteinID:
XP_010446741
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Position
12:complement(1752800..1754340)
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AA seq
374 aa
AA seq
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MASVTLGSWVVVHHNNHLSSSSSSSSVFTKPRSRSSSLMTLTKPISLRSKRTASSIVASS
VVTKEDNRSSSSSSSSSFDFMSYIITKAESVNKALDSSVPLREPLKIHEAMRYSLLAGGK
RVRPVLCIAACELVGGDESVAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVY
GDDVAVLAGDALLSLAFEHLASATSSEVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSE
GLDLNDVGLDHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVD
DILDVTKSSQELGKTAGKDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVA
PLLALANYIANRQN
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagtgactctaggttcatgggttgttgttcatcacaacaatcatctctcttct
tcttcttcctcctcctcagtgttcaccaaacccagatccagatcttcttctctcatgact
cttactaaacccatctcactccgttcaaaacgcaccgcttcatcaatcgttgcttcatcc
gtcgttactaaagaagacaaccgaagctcatcatcctcgtcatcatcgtcattcgatttc
atgtcttacatcatcaccaaagccgaatctgtcaacaaagctttggattcatctgttcct
ctccgtgagccactcaagatccacgaagccatgcgttactctctcctcgccggtggcaaa
agagtcagacctgtcctctgcatcgccgcttgtgagctcgtcggcggcgatgaatccgtc
gctatgcctgccgcttgcgccgtcgagatgatccacaccatgtcgttgatccacgacgat
ctcccttgtatggataacgacgatctccgccgtggtaaacccaccaaccacaaagtgtac
ggagacgacgtcgctgtgttagccggagacgcgcttctctcgttagctttcgagcattta
gcgtcggctacgagttccgaagtttctcccgtgagagtggtcagagccgttggggaattg
gctaaagctatcggaacggaagggttggtggcgggtcaagtcgtggacattagtagcgaa
gggttggatctaaacgacgtcggtttggatcatttggagtttatccatttgcataaaacg
gctgcgttgcttgaagcttctgcggtattgggagctatcgttggtggaggaagtgacgat
gagatcgagaggctgaggaagtttgcgaggtgtattggtctgttgtttcaggtggttgat
gatatattggatgtgaccaagtcgtcccaagaacttgggaaaactgcagggaaagatttg
attgcggataagttgacgtatccgaagattatgggattggagaaatctagagagtttgct
gagaagttgaatagagaggctcgtgatcagcttttagggtttgattctgataaggttgct
cctttgttggctttggctaattacattgctaatagacagaactga
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