Camelina sativa (false flax): 104729572
Help
Entry
104729572 CDS
T05044
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2-like isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104729572
Enzymes [BR:
csat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
104729572
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
104729572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
104729572
NCBI-ProteinID:
XP_010446826
LinkDB
All DBs
Position
12:2097410..2100703
Genome browser
AA seq
606 aa
AA seq
DB search
MKIVTYNVNGLRQRVSQFDSLLKLLDSFDADIICFQETKLRRQELTADLAIADGYESFFS
CTRTCEKGRTGYSGVATFCRVKSASLSCEIALPVAAEEGITGLVSSNSRCVKTETYAIAE
GLEEYEKDELLRIDQEGRCVITDHAHFVVLNVYGPRAVADDAERIEFKHRFYDILERRWE
CLLRQGRRVFVVGDLNIAPSAMDRCEAGADFEKNEFRKWFRSLLVERGGSFSDVFRSKHP
ERKDAFTCWSSSTGAEQFNYGSRIDHILVAGSCLHQDKDKQGHSFLACHVKECDILTEYK
RFKDENMSTRWKGGLGTKLKGSDHVPVFTSFDDLPDIPAHSTPPLASRYLPMIYGFQQTL
VSVFMKRQANEEAKANEVACSTSSQGNASSSCGDISTGPLRNCGSKGISLEKSCCFENES
TCSVTESDIMASRGLIDNPSDAICVSSGRAGNISRDGNRKKARKVQSSQLSLKSFFTANS
KANNGGDKSSSSSQSSQVDSITQPAVSSREDGESTTSTQEQEQSGSSAKQKNGTALMEWQ
RIQNLMQNSIPLCKGHKEACVARVVKKPGPTFGRRFYVCSRAEGPSSNPEANCGYFKWAS
SKFKDK
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtgacttacaacgttaatggccttaggcaacgagtttcccagtttgattct
cttctcaaacttctcgattccttcgacgctgatatcatctgcttccaggaaacgaaactt
agaagacaggaattaacagcggatttggctatagctgatgggtatgaatcgtttttctcg
tgcacacgcacttgtgagaaaggtcgtactggttactctggtgtagcaacgttttgcagg
gtaaagtcagcatctttaagctgtgaaattgctttgcctgttgcagcggaagaaggcatc
actggtcttgtaagcagtaattcacgatgtgtgaagactgaaacgtatgcgatagctgaa
gggcttgaggaatatgagaaagatgagcttcttaggattgaccaagaaggacgctgtgtt
ataactgatcatgcccactttgttgttctcaatgtctatggaccacgagctgtagctgat
gatgctgagaggattgagtttaagcatcggttttatgatattttagagagaagatgggag
tgtcttttgcgtcaaggaagaagggtatttgttgttggggatctcaacattgctccttct
gctatggatcgatgtgaagctggggctgatttcgagaaaaacgagttcagaaagtggttt
agatctttgctagttgaacgtggaggctcattctcagatgttttcagatcaaagcatcca
gaaaggaaagatgcattcacatgttggtcctcaagtactggagcagaacaatttaactac
ggttcgaggattgatcatatcttagttgctggatcatgcttgcatcaagacaaagataag
caaggccatagttttcttgcttgccatgtcaaggaatgtgacatattgacagagtataag
cggtttaaggatgaaaatatgtcaacaaggtggaaaggtgggctaggtacaaaattaaag
ggatcagaccatgtacctgtattcactagttttgatgatttaccagacatccccgcacat
agcacgccgccattagcgtcgagataccttcccatgatttatggtttccagcaaactctt
gtttcagtgtttatgaaaaggcaagccaatgaggaagccaaagccaatgaagtggcatgt
tcaacatcgagtcaaggtaatgcttcatcaagctgtggagatatttcgacaggaccactg
agaaactgtggttcaaaggggatttcactggagaaatcttgttgttttgagaacgaatcc
acttgcagcgttacagaatcagacattatggcatcgagaggtttaattgataaccctagt
gatgcaatctgtgtatcatcagggagagctgggaatatctctagagatggaaacaggaaa
aaagcgaggaaagtccaatcatctcagctttctctcaagtcctttttcactgcaaactca
aaggcgaacaatggtggggataagtcttcatcctccagtcagagctctcaagttgatagc
atcacacaaccggcagtttccagcagagaagacggtgaatcgactacttcaacacaagaa
caagaacaaagcggttcttcagctaaacaaaagaacggtacagctctaatggagtggcaa
agaatacagaacctaatgcaaaacagcatacctctctgcaaaggacataaagaagcttgt
gttgctcgggtcgtaaagaaaccaggtcccacatttggccgtagattctacgtctgctct
cgagctgagggaccttcctctaatccagaagcaaactgtggttatttcaaatgggcttca
tcaaaattcaaagacaagtaa
DBGET
integrated database retrieval system
