Camelina sativa (false flax): 104729575
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Entry
104729575 CDS
T05044
Name
(RefSeq) transcription-associated protein 1-like isoform X1
KO
K08874
transformation/transcription domain-associated protein
Organism
csat
Camelina sativa (false flax)
Pathway
csat03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104729575
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
csat01001
]
104729575
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104729575
03036 Chromosome and associated proteins [BR:
csat03036
]
104729575
Protein kinases [BR:
csat01001
]
Serine/threonine kinases: Other
PIKK family [OT]
104729575
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104729575
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
104729575
STAGA complex
104729575
TFTC complex
104729575
TIP60 complex
104729575
SAGA complex
104729575
SLIK complex
104729575
NuA4 complex
104729575
Chromatin remodeling factors
ASTRA complex
104729575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tra1_ring
FAT
PI3_PI4_kinase
FATC
Pox_J1
TPR_21
Motif
Other DBs
NCBI-GeneID:
104729575
NCBI-ProteinID:
XP_010446829
UniProt:
A0ABM0UV68
LinkDB
All DBs
Position
12:2084857..2092345
Genome browser
AA seq
1757 aa
AA seq
DB search
MYKQALDFLSKALEVWPNANVKFNYLEKLLSSMPPSQSDPSTALAQGLDVMNKVLEKQPH
LFIKNNISQISQFLELSFKHKMFDAGKSLCSLLKMVFIAFPHDGASTPPDIKLLYQKFSE
LIQKHVHPVTAPQVSGDDNSLGSIGFILVVLKTLAEVQKNFVDPYVLVHILQRLSRDLGS
AAGAHPRQSQRTDSDSAVTSFRQTADVGAVISNIKSVLELIDERVMLLADCKRPVTQILN
TLLSEKGTDSSVLICVLDMLKRWAEDDFGKTSSSGSSGAFLTQKDIVSFLQKLAQVDKQH
FSSVALDEWDKAYLQLLYGLCADSTKYPLALRQEISLKVERHSMLGLRARDPDMRRKFFL
LYHESLGKNLFARLQYIIQNQDWEAMGDVFWLKQGLDLLLAILIEEKPITLAPNSARVVP
LLSSQNPGTHYQPPAMPEGPEEVGSMFDSIVMKHAQFLSAASKLQVADVVIPLRELAHTD
ANVAYHLWVLVFPIVWATLHKEEQKALAKPMISLLSKDYHKKQQGHRPNVVQALLEGLQL
SHPQPRMPSELIKYIGKTYNAWHLALTLLETHVMLFTNESRCAESLAELYRLLNEDDRRF
GLWKNRSNTTESRAGLSMVQHGFWQRAQSLFYQAMVKATQGTYNNTVPKAEMCLWEEQWL
HCATQLGQWDALVDFGKSTENYEILLDSLWKAPDWAYLKDHVIPKAQVEETPKLRLVQAC
FALHEKNANGVGDAENIVGKGVDLALEQWWQLPEMSLHARVPLLQQFQQLVEVQESSRIY
VDITNGSKVPGNAAFGGQGNHYADLKDILETWRLRAPNEWDNMTIWYDMLQWRNEMYNVV
IDAFKDFITSNTQLHHLGYRDKAWNVNKLARIARKQGLYDVSVQILEKMYGHSQMEVQEA
FVKIKEQAKAHLETKGELATGLNLVNSTNLEFFLAKNKAEIFRLKGDFHLKLNDTEGANI
AYSNAITLFKNLPKGWISWGNYCEMAYQETQEEIWLEYAVSCFLQGIRFGVSNSRSHMAR
VLYLLSFDTANEHVGRTFDKHLDQVPHWVWLSWIPQLLLSLQRTEAPHCKLVLMKIAAVF
PQALYYWLRTYLLERRDAVNKSELSRIVLAQRMQQNVPGVSAVHGGGNLPSETQIHQGAQ
TSGAVGTTRDNGNPHAQESERASMENNFNSGNDQPMNQSSSTINENSQHAVIRDGASLAM
SAAGAFDAAKDIMEALRSKHNNLASELEVLLTEIGSRFVTLPEERLLAVVNALLHRCYKY
PTATTAEVPQPLKKELSGVCRACFSADAVTKHVAFVREYKQDFERDLDPESNYFPVTLAD
LTKKLKDWKIILQSNVEDRFPVVLRLEEESKVLRNFNVVDVEIPGQYFADQEVAPDHTVK
LDRVGADIQIVRRHGSSCRRLTLIGSNGSQKHFIVQTSLTPNARSDERILQLFRVMNQMF
DKHKESRRRHLGLHTPIIIPVWSQVRMVEDDLMYNTFLEVYENHCERNGRESDHPITYFK
EKLNQAISGQISPEAIGDLRLQAYGEITKNIVNDTIFSQYMYKTSMSGSHLWAFKKQFAV
QLAVSNFMSFILQIGGRSPNKILFAKNTGKMFQTDFHPSYDSNGMVELNEPVPFRLTRNM
QAFLSHFGVEGPLMSNMCSASQAVFSSKQNEHLRYQLAMFFRDELLSWFGRRPLGVPIPP
VTGIATLSSAELKHKVNLNVDDVIGRIRGIAPQYFCEEDENSVEPPQSVQRGVNELVEAA
LSPRNLCMMDPTWHPWF
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaacaagctttagattttctttcaaaagctttggaagtttggccaaatgcgaac
gtcaaatttaactatttagaaaagctgcttagtagcatgccaccgtctcagtcagatccg
tccacagcacttgctcagggcttggatgtcatgaacaaggttctggagaagcagccgcat
cttttcattaaaaacaacatcagccagatctcacagtttcttgagctgtctttcaaacac
aagatgttcgacgctgggaaatcgctatgctctttgttgaagatggttttcatcgccttc
ccacatgatggagctagtacgcctcctgacataaagctgttgtatcagaaattcagtgag
ctgatacaaaaacatgtgcatcctgttactgctccacaagtgtcaggagatgataactct
ctcggttcaatcggctttatacttgttgtcctcaaaaccttggcagaggttcagaaaaac
tttgttgatccttatgtactggtgcatatccttcagcgtctttcgcgggatctgggatca
gcagcgggtgctcatcctagacaaagccagcggacagattcagattctgcagtaacttct
tttcgtcaaactgctgatgttggggcagttatatctaatataaagtcggtcttggaactt
attgatgaaagggttatgcttttagcggattgcaaaagacctgtgactcaaatattgaac
acgttgctttcagagaaggggactgattctagtgtgcttatctgcgtgctagacatgtta
aaaaggtgggctgaggatgatttcgggaaaacaagttcatcggggtcctctggtgccttt
cttacccagaaagatatagtttctttcctccagaagcttgcacaggttgataagcagcac
ttctcatctgttgctttggatgagtgggataaggcgtatctccagcttttatatggactt
tgtgccgattcaacgaagtatccgttggcactccgacaagagatctctctgaaagttgag
agacattccatgcttggtttacgggcaagggatcctgatatgcgaaggaagttcttcttg
ttataccatgagtctctcggaaaaaatttatttgcacggttgcagtatattattcaaaac
caagattgggaagctatgggtgatgttttttggctcaaacagggtcttgatctcctccta
gccattttaattgaggagaagcccattacgctagcaccgaattctgccagggtagtacca
cttttgtcatcacaaaatcctggaacacattaccaaccacctgctatgccagagggacct
gaagaagttggctcaatgtttgatagcattgtaatgaagcatgcacaatttcttagtgcg
gcaagcaaacttcaggtcgctgatgttgttatccctttaagggagcttgctcacacagat
gccaatgttgcttaccatttgtgggtgctagtatttccaattgtgtgggcaactctacac
aaggaagagcagaaagctttagctaagcctatgatttctctactttcgaaggactaccac
aagaagcagcaagggcacagaccaaatgttgttcaagcacttctggaagggcttcagttg
agccatcctcaacctaggatgcctagtgagcttatcaaatatataggaaaaacgtacaat
gcatggcatcttgcattgactttgttagagactcatgtcatgctgttcacgaatgaatca
agatgtgctgagtctcttgctgagctttatcgtttgttaaacgaagatgacaggagattt
ggattgtggaagaataggtccaacaccaccgaatcgagagctgggctttcaatggttcaa
catggattttggcaacgtgctcagagcctattttatcaggcaatggttaaggcaacccaa
ggcacttacaataacacagtacctaaggccgaaatgtgcctgtgggaggagcaatggctc
cactgtgccactcaacttggtcagtgggatgccctggtagattttggaaaaagcaccgag
aattatgaaattttgcttgatagtctttggaaagctccagattgggcatacttgaaagat
catgtgatacccaaagcacaagtggaagagacgccgaagcttcgtttggttcaagcttgt
tttgcccttcatgaaaaaaatgcaaacggtgtaggagatgctgaaaacatagttgggaaa
ggcgttgatcttgctttggaacagtggtggcagttaccggaaatgtctcttcatgctagg
gtgcctctactgcagcaatttcaacaactagtggaggtgcaagagtcttctagaatttat
gttgacatcacaaatgggagtaaagttcctggaaatgctgcttttgggggacagggaaat
cattatgcagatctgaaagacattcttgagacttggaggctaagagctccaaatgaatgg
gataatatgaccatctggtatgatatgctgcagtggaggaatgagatgtataatgttgtt
attgatgcatttaaggattttataacttcaaatactcaacttcatcaccttggttatcgt
gacaaagcatggaacgtcaataagcttgctaggatagctcggaaacaagggctttatgat
gttagcgttcagatacttgaaaaaatgtatgggcactcgcaaatggaagtacaggaagcc
tttgttaaaattaaagagcaggcaaaagctcatctggaaacgaaaggagagctcgctact
ggtcttaatctggttaatagcacaaatttggagttctttctagcgaagaacaaggcagaa
atttttcgactaaagggggattttcatttgaagctaaacgacactgaaggtgctaatatt
gcatattccaacgcaatcaccctattcaaaaatttacccaaaggatggataagctgggga
aattactgtgagatggcataccaagaaacacaagaggaaatctggctggaatatgccgtt
agctgctttcttcagggtataagatttggagtttccaattccagaagtcacatggctcgt
gttctttaccttcttagtttcgatacagcaaatgagcatgttggtagaacatttgataaa
cacttggaccaagtacctcactgggtgtggctttcttggatcccacagctgttgctttcc
ttgcagcgtacagaagcaccccattgcaaattagttctaatgaaaattgctgcagtattc
ccgcaggctctctattactggcttcgcacctacttactagaacgccgtgatgcagtaaat
aaatctgaacttagcagaattgttttggctcaaagaatgcagcagaatgttcctggtgtt
agtgcggttcatggtggaggcaatttaccatcagaaactcaaatccatcaaggtgctcaa
acaagtggggctgttggaaccacccgtgataatggtaacccacatgcgcaagaaagtgaa
cgtgccagtatggaaaacaactttaattcagggaatgatcagcctatgaaccaaagcagt
tcaactatcaatgaaaatagtcaacacgcagtaatacgggatggtgcttccttggcaatg
tctgctgctggtgcttttgatgctgcaaaggatattatggaagctcttaggagtaaacat
aacaacttggccagtgaacttgaggttcttctcacggaaataggttcgaggtttgttact
ctaccagaagaaagacttcttgcggttgtgaatgctttgttgcatcgatgttacaaatat
ccaactgccaccactgctgaagttccccaaccgctcaagaaagaactctcgggtgtatgc
agagcttgtttttctgcagatgctgtgaccaagcatgtcgcatttgtgagagaatacaaa
caggatttcgagcgtgaccttgatccagaaagcaattatttccctgtcacactcgcagat
ctgacaaagaaactgaaagactggaaaatcattcttcagagtaatgttgaagacaggttc
cccgttgtgttgagattggaagaagagagcaaggtgctgcgtaacttcaatgttgttgat
gtggagataccaggacagtactttgctgaccaggaagtcgcacctgatcatacagtaaag
ttggatagggttggagcagacatacaaattgtacgaaggcatgggagcagctgcagacgt
ttgactcttattggctccaatggctcgcaaaagcattttattgttcaaacatcattaact
cctaatgcgaggagtgatgaacgaatcttgcagcttttccgtgtgatgaatcaaatgttt
gacaagcataaagagtcgagaagacgccatttaggacttcacactccgatcataatccct
gtctggtctcaggtccgaatggttgaggatgatctcatgtacaacactttccttgaggta
tatgagaatcactgcgaaaggaatggtcgagagtcagatcatcctattacctacttcaag
gagaaactcaatcaagccatctcagggcaaatctcaccagaagcaattggagatcttcga
ctacaggcttatggtgaaatcacaaagaacatagtcaatgacaccatcttctctcagtac
atgtacaagacatcaatgagcggaagtcatctttgggctttcaagaagcaattcgctgtc
cagctagctgtatccaatttcatgtccttcattctacaaattggtgggagatccccaaac
aagatcttgttcgccaaaaatacggggaaaatgttccagacagattttcatccatcgtac
gactccaatgggatggtcgagctcaacgaacctgtccctttccgcctcacaagaaacatg
caagcattcctatcgcattttggtgtcgaaggtcctctcatgtcaaacatgtgttctgca
tctcaagcagttttctcctccaagcaaaacgaacatcttcggtatcaattagccatgttc
tttcgcgatgagcttctatcatggtttggaagaagacctcttggggtgcctattcctcct
gttacaggaattgctactttgagttcggccgagctgaagcacaaagttaacttaaacgtt
gacgatgtcattggacgaatcagaggaatagcgccacagtatttctgtgaagaggatgag
aactcggtggagccgccacagtctgtacaaagaggtgtgaatgaattggtggaggcagct
ttgtcgcctcgcaatctatgtatgatggatccaacatggcatccgtggttctaa
DBGET
integrated database retrieval system
