Camelina sativa (false flax): 104729710
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Entry
104729710 CDS
T05044
Name
(RefSeq) WD-40 repeat-containing protein MSI3
KO
K10752
histone-binding protein RBBP4
Organism
csat
Camelina sativa (false flax)
Pathway
csat03082
ATP-dependent chromatin remodeling
csat03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104729710
03083 Polycomb repressive complex
104729710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104729710
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
104729710
Histone modification proteins
HAT complexes
HATB complex
104729710
HDAC complexes
Sin3A-HDAC complex
104729710
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
104729710
PRC2.2
104729710
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
104729710
Heterochromatin formation proteins
Other heterochromatin formation proteins
104729710
Chromatin remodeling factors
NuRD complex
104729710
NuRF complex
104729710
NuRF complex (fruit fly)
104729710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR19_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
ANAPC4_WD40
WD40_RFWD3
Beta-prop_SCAP
MIOS_WD40
eIF2A
Beta-prop_SPT8
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
104729710
NCBI-ProteinID:
XP_010447004
UniProt:
A0ABM0UVL2
LinkDB
All DBs
Position
12:2674921..2677092
Genome browser
AA seq
415 aa
AA seq
DB search
MAAEEGKEEPGMDQVEEDFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSNPIPYAKDPS
FAVHKLILGTHTSGGAQDFLMVADVVIPTPDAEPGLGGRDQDPIVPKVEIKQKIRVDGEV
NRARCMPQKPTLVGAKTSGSEVLLFDYARLCAKPQTSECDPDLRLMGHEDEGYGLAWSSF
KEGYLLSGSQDRKICLWDVSATADDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGGD
CQLVIWDLRTNQMQHQVKVHEREINYLAFNPFNEWVLATASSDSTVALFDLRKLTAPLHV
LSRHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSH
GGHKAKISDFAWNKDEPLVISSVAEDNSLQVWQMAESIYREDDEDDDEEGNQNAQ
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagaagagggtaaagaagaaccgggaatggatcaggtagaagaagacttctct
atttggaaaaggaacacaccatttctctacgaccttatgatctctcatccgctcgaatgg
ccatctctaactcttcattgggttccttctaatccgattccgtatgcgaaagatccttcc
tttgccgtccataagcttatactcggcacccatacctctggtggtgcccaggattttcta
atggtcgctgacgtcgttatcccgacacctgacgctgaaccaggattaggcggacgagat
caagatcctatcgtccctaaggtggagataaagcagaagatacgtgttgatggagaagtg
aacagagctcggtgtatgccacaaaagccaactcttgtgggtgctaaaacgagtgggtct
gaggtgttactctttgattacgccagactctgtgcaaagcctcagactagtgagtgtgat
cctgatctcaggctaatgggacatgaagatgaaggttatggattggcttggagctccttc
aaggaaggttatcttttgagtggctcacaagatcggaaaatctgcctctgggatgtttca
gctactgccgatgataaggttttgaaccctatgcatgtgtatgagggacatcaaagcatc
atcgaagatgtagcatggcacatgaagaatgagaacatattcggttctgcgggtggtgat
tgtcaactggtgatatgggacttacggacaaaccaaatgcaacaccaagtcaaagttcac
gagagagagataaactatcttgctttcaatccctttaatgaatgggtattagccacagcc
tcctcagattcgactgtcgccttgtttgaccttcgcaagcttactgcaccattacatgtt
ctgagcagacacgagggagaagttttccaagtggagtgggatcccaatcatgaaacagtg
cttgcatcttctggtgaggaccgaagactcatggtctgggatatcaacagggtcggggat
gagcagcttgaaatagagttggatgcagaagatggtccacctgagctgctcttctctcat
ggaggccacaaggccaagatatcagactttgcctggaacaaagacgagcctttggtcatc
tcaagtgtagctgaagacaacagtcttcaagtctggcaaatggcggaaagcatctaccgc
gaagatgatgaggatgatgatgaagaaggcaaccaaaatgcacaatga
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