Camelina sativa (false flax): 104729712
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Entry
104729712 CDS
T05044
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 37f-like
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
3.6.4.10
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03060
Protein export
csat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
104729712
04141 Protein processing in endoplasmic reticulum
104729712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
csat03110
]
104729712
04131 Membrane trafficking [BR:
csat04131
]
104729712
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104729712
Enzymes [BR:
csat01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
104729712
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP70 / DNAK
104729712
Membrane trafficking [BR:
csat04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
104729712
Autophagy
ER-phagy
ER stress-related proteins
104729712
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104729712
Exosomal proteins of other body fluids (saliva and urine)
104729712
Exosomal proteins of colorectal cancer cells
104729712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Radial_spoke_3
Hydantoinase_A
DDR
DUF7357
FtsA
Motif
Other DBs
NCBI-GeneID:
104729712
NCBI-ProteinID:
XP_010447007
LinkDB
All DBs
Position
2:complement(19340503..19343672)
Genome browser
AA seq
668 aa
AA seq
DB search
MARSFGANGTAVLAIIFLGCLFAFSTAKEEATKLGSVIGIDLGTTYSCVGVYKNGHVEII
ANDQGNRITPSWVGFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFEDKEVQKDRKL
VPYQIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAYLGKKIKDAVVTVPA
YFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSV
LTIDNGVFEVLSTNGDTHLGGEDFDHRIMEYFIKLIKKKHQKDISKDNKALGKLRRECER
AKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKS
QIDEIVLVGGSTRIPKVQQLLKDFFEGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETK
DILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSL
TKDCRLLGKFDLNGIPPAPRGTPQIEVTFEVDANGILNVKAEDKASGKSEKITITNEKGR
LSQEEIDRMVKEAEEFAEEDKKVKERIDARNALETYVYNMKNQVNDKDKLADKLEGDEKE
KIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQRSGGAPGAGGESTTEE
EDESHDEL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggctcgctcgttcggagcaaacggcactgctgtgctggcgatcatcttcttaggatgt
ttatttgcgttttcaactgcaaaagaagaggccaccaagttgggatcagttatagggatt
gatcttggtaccacttactcttgtgtcggtgtttacaagaatggtcacgttgaaattatt
gccaacgaccaaggaaaccgtattacaccttcctgggttggtttcactgactctgagagg
ctcattggtgaggctgctaagaatcaggcggctgttaatccagagaggactatcttcgac
gtcaagagattgatcggccgaaaatttgaggacaaggaggtccaaaaggacaggaaactt
gtaccttaccagattgtgaacaaggacggtaagccatacattcaagtcaagatcaaggat
ggtgagactaaggttttcagtcctgaggagatcagtgctatgattctgactaagatgaag
gagacagccgaagcataccttggaaagaaaatcaaggacgctgttgttaccgttccagct
tacttcaacgatgcccaaaggcaagctaccaaggatgctggtgttattgctgggctcaat
gttgctagaatcatcaatgagcctactgctgctgctattgcctatggtctggataaaaag
ggtggtgagaagaacatccttgtctttgatcttggtggtggtacctttgatgtcagtgta
ttgaccattgataatggagtgttcgaggttctctccacaaacggtgacactcacttggga
ggtgaggactttgaccacaggatcatggagtacttcatcaagttgatcaagaagaagcac
cagaaggacatcagcaaggacaacaaggctcttggtaagctccgaagggaatgtgagagg
gctaagagagctcttagtagccagcaccaagtccgtgtagagattgagtcactctttgat
ggtgttgatttctctgagccactcaccagagctcgtttcgaggagctgaacaatgacttg
ttcaggaagaccatgggaccagtgaagaaggccatggatgatgctggtctacagaagagc
cagatcgatgagatcgtccttgttggtggaagcaccaggatcccaaaggttcagcaacta
ttgaaggacttctttgaaggtaaagagccaaacaagggtgtgaacccagatgaggctgtt
gcttatggtgctgctgttcagggtggtattttgagtggagaaggcggtgatgagaccaaa
gatattcttcttcttgatgtggcaccactcactttgggtattgagactgtaggaggagtg
atgacaaagctgatcccgagaaacacggttattccaaccaagaaatctcaagttttcaca
acgtaccaagaccagcagacaactgtctcaattcaggtctttgaaggtgaaagaagtctc
accaaggactgcaggctgctcgggaaattcgacctcaacggaatcccaccggccccaaga
ggaacccctcaaatcgaggtcacattcgaagtggacgccaatggtatcctgaacgtgaaa
gcagaggacaaggcgagtggtaaatcagagaagattacaatcacaaacgagaagggtcgt
ctgagccaagaagagattgaccggatggtgaaggaggcagaggagtttgcagaggaagac
aagaaggtgaaggagaggatcgacgccaggaatgcgttggagacgtacgtgtacaacatg
aaaaaccaagtgaacgacaaggacaagcttgcagacaaattggaaggggatgagaaggag
aagatcgaagcagctaccaaagaggccttggagtggctcgacgagaaccaaaactcagag
aaagaagagtacgatgagaagctcaaggaggtagaagcagtgtgtaacccaatcatcacg
gcagtataccagagatcaggcggagcaccaggtgcaggaggagaatcaacaactgaggag
gaagatgagtctcatgatgaactctag
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