Camelina sativa (false flax): 104729749
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Entry
104729749 CDS
T05044
Name
(RefSeq) inactive squalene synthase 2-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00100
Steroid biosynthesis
csat00909
Sesquiterpenoid and triterpenoid biosynthesis
csat01100
Metabolic pathways
csat01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
104729749
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
104729749
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
csat01006
]
104729749
Enzymes [BR:
csat01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
104729749
Prenyltransferases [BR:
csat01006
]
Terpene biosynthesis
Squalene/phytoene synthase
104729749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
104729749
NCBI-ProteinID:
XP_010447047
LinkDB
All DBs
Position
12:complement(2827481..2830547)
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AA seq
413 aa
AA seq
DB search
MGSLSTILRHPDELYPLLKLKIAINKAQKQIPLEPNLAFCYTMLHKVSKSFSLVIQQLGT
ELRNAVCVFYLILRALDTVEDDTSVAVEIKLPILIAFHRHIYDGDWHFSCGTKEYKVLMD
QFHHVSAAFLELEKGYQEAIEDITKRMGEGMAKFICKEVETVDDYDEYCHYAAGLVGLGL
SKIFMASELEMLTPDWKHNSNSTGLFLQKTNIIKDYLEDINEIPKSRMFWPREIWGKYVD
KLEDFKNEENATKAVQCLNEMVTNALIHVEDCLKSLASLRDPAIFQSCAIPQIVAIGTLA
LCYNNVQVFRGVVRLRRGLIAKIIDRTKTMDDVYGVFCDFSCMLQSKVDKNDPNAVITLN
RLETIKKVCRDNGVLHKRKTYVKDEAQSKDVFIIMLVLLLAIVVMYLKANHCK
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcttgagtacgattttaagacacccggatgagttatatccgcttttgaagttg
aaaattgcaataaacaaagctcagaagcagatcccacttgagccaaacttagctttctgt
tatacaatgctccacaaagtttctaaaagcttttctcttgttattcaacaacttggcact
gagcttcgtaacgcagtgtgtgtgttctacttgattctccgagctcttgataccgttgag
gatgacacaagcgtagcagtggagatcaaacttccaattctgatagctttccaccgtcac
atatacgatggtgactggcatttttcatgtggtacgaaagagtacaaggttctgatggac
cagtttcaccatgtttctgcagcttttctggaacttgaaaaagggtatcaagaggctatt
gaagatataactaaaagaatgggtgaaggaatggccaagttcatttgtaaagaggtagaa
acagttgatgactatgatgaatactgccattatgctgctggacttgtgggtttaggtttg
tcaaaaatcttcatggcttcagaattagaaatgctgactccagactggaagcacaattca
aattctacaggtttatttctccagaaaacaaacattatcaaagattatcttgaagacatt
aatgagataccaaaatcgcgcatgttttggcctcgtgagatttggggaaaatatgttgac
aagcttgaggacttcaaaaatgaggagaatgcaacaaaagcagtgcagtgtctgaatgaa
atggtcactaatgcattgattcacgttgaagattgtttgaaatccttggcttcattgcgt
gaccctgcaatatttcaatcttgtgccatccctcagatcgtggctattggaacactagca
ttatgctataacaatgtacaagtctttagaggcgtcgtgagattgaggcgagggctaata
gctaaaatcattgatcgcacaaagacaatggatgatgtctatggtgtgttctgtgatttt
tcttgcatgctacaatcaaaggttgacaagaacgatccaaatgcggtgataacattaaac
cgactcgaaaccattaagaaagtttgcagagataatggagtccttcacaaaagaaaaact
tatgttaaagatgaagcacaatccaaggatgtctttattataatgcttgtgcttctactg
gccatagtcgttatgtatctcaaagcaaatcattgtaagtag
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