Camelina sativa (false flax): 104729750
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Entry
104729750 CDS
T05044
Name
(RefSeq) squalene synthase 1 isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00100
Steroid biosynthesis
csat00909
Sesquiterpenoid and triterpenoid biosynthesis
csat01100
Metabolic pathways
csat01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
104729750
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
104729750
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
csat01006
]
104729750
Enzymes [BR:
csat01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
104729750
Prenyltransferases [BR:
csat01006
]
Terpene biosynthesis
Squalene/phytoene synthase
104729750
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
DUF7859
DUF2615
CUX1_N
Motif
Other DBs
NCBI-GeneID:
104729750
NCBI-ProteinID:
XP_010437579
UniProt:
A0ABM0U8P0
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Position
11:complement(3048944..3053111)
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AA seq
419 aa
AA seq
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MGSLGTMLRYPDDIYPLLKMKRAIEKAEKQIPPEPHWGFCYSMLHKVSRSFSLVIQQLNT
DLRNAVCVFYLVLRALDTVEDDTSIPTDEKVPILIAFHRHIYNTDWHYSCGTKEYKVLMD
QFHHVAAAFLELEKGYQEAIEEITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL
SKLFLAGGSEVLTPDWEAISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYAD
KLEDLKYEENSTKSVQCLNELVTNALMHIEDCLKYMAALRDPSIFRFCAIPQVGEGNIII
LIMAIGTLALCYNNVQVFRGVVKLRRGLTAKVIDRTKTMADVYGAFYDFSCMLKTKVDKN
DPNASITLNRLEAVQKLCIDTGVLNNRKSYVDDKGQPNNVFIIMVVILLAIVFAYLRAN
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggggagcttagggacgatgctgagatatccggatgatatatatccgctcctgaagatg
aaacgagcgattgagaaagcggagaagcagatcccgcctgagccacactggggcttctgc
tattcaatgctccacaaggtttctcgaagcttctctctcgttatccagcagctcaacacc
gaccttcgtaacgctgtgtgtgtgttctacttggttctacgagctcttgatactgttgag
gatgatacaagcataccaactgatgaaaaggttcccatcctgatagctttccaccggcac
atttacaatactgactggcactattcatgtggtacgaaggagtacaaggttctaatggac
caatttcatcacgttgctgcagcttttttggaacttgaaaaagggtatcaagaggctatc
gaggaaattactaaaagaatgggtgcaggaatggccaagtttatctgccaagaggtagaa
actgttgatgactatgatgaatactgccactatgttgctgggcttgtgggtttaggtctg
tcgaaactcttccttgctgggggctcagaggttttgacaccagattgggaggcgatttct
aattcaatgggtttatttctacagaaaacaaacattatcagagattatcttgaggacatt
aatgagataccaaaatcccgcatgttttggcctcgcgaaatttggggcaaatatgctgac
aagcttgaggatttaaaatacgaggagaactctaccaaatccgtgcagtgcttgaatgaa
ctggttaccaatgcgttgatgcatattgaagattgcctgaaatacatggctgcgttgcgt
gatccttccatatttcgtttctgtgccatccctcaggttggagaaggaaatatcataata
ttgatcatggcgattggaacacttgcattatgctataacaatgtacaagtatttagaggc
gttgtaaaactgaggcgaggtctaactgctaaagtcattgatcgcacaaagacaatggct
gatgtctacggtgcattctatgatttttcttgcatgctgaaaacaaaggttgacaagaac
gatccaaatgccagtattacactaaacagacttgaagccgttcagaaactctgcatagac
actggagtccttaataacagaaaatcatatgttgatgacaaaggacaaccaaacaatgtc
tttattataatggttgtcattctactggcaatagtctttgcatatctgagagcaaactga
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