Camelina sativa (false flax): 104729777
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Entry
104729777 CDS
T05044
Name
(RefSeq) SWI/SNF complex subunit SWI3D
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
csat
Camelina sativa (false flax)
Pathway
csat03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104729777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104729777
03036 Chromosome and associated proteins [BR:
csat03036
]
104729777
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104729777
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104729777
PBAF complex
104729777
GBAF(ncBAF) complex
104729777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
MEF2_binding
Motif
Other DBs
NCBI-GeneID:
104729777
NCBI-ProteinID:
XP_010447081
LinkDB
All DBs
Position
12:complement(2924470..2928807)
Genome browser
AA seq
983 aa
AA seq
DB search
MEEKRRDSAGTLASGGSTGDTPASEPMPATRRRGGGLKRKANALGGSNFSSSTPSKRMLT
REKAMLASFSPVHNGPLTRARQAPSNLVSAADGVKSELLNVAVGTDGGEKPKEEEELNKA
IREWEALEAKIEADFDAIRSRDCNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRT
SEVYMEIRDWIMRKFHSNPNIQIELKDLTELEVGDSDAKQEVMEFLDYWGLINFHPFPPA
DTGSTAPDHDDLEDKESLLNSLYRFQADEACPPIVHKPRLTAQATPSGLFPDPVATDELL
KQEGPAVEYHCNSCSADCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEA
PGVGSGKWTDQETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQID
HKDPSTKDTTDLAVSKDDKSVPKDTPEEAENKTRVDEDETMKEVPEPEVDNEGKVSQESS
KPEEETNEVEADQKTPKLETVTDERCQEETDENIALKSLAEAFEDVGYSSTPEASFSFAD
LGNPVMGLAAFLVRLAGSDVATASARASIKSLQSNSGLLLATRHCYILEDPPDNKKDSTE
SKSADAEDNDENVHKDEQPEEKIQKAEDVSLNSDDREMPDTDTGKEDQNSVSEEKQPGSR
TENSTTKPDAVQEKRSSKPVTTDSSEKPADVICQSQDKCSGKELQEPLKDGNKLCSENKD
ASQATVSQSAADDASQPEASKDVEMKDTLQSEKDPQDVVETVGEEVQQAKEEGAKDVLST
PDTSVVQQPIGSASATENGTAGEIPKKEGKKEKDVCEGTKDKHNIQKLKRAAISAISAAA
VKAKNLAKQEEDHIRQLSGSLIEKQLHKLEAKLSIFNEAESLTMRVREQLERSRQRLYHE
RAQIIAARLGVPPSMSSKASLPTNRIAANFANVGPRPPLGMAFPRPPMPRPPPGFTIPGS
FAAGTTMAGSSDPSPGSNNVSSV
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaacgacgcgattctgctggaaccctagcttctggtggtagcactggagat
actccggcatctgagccgatgccggcgacacggcgccgtggcggaggtttgaaaaggaaa
gcgaatgctctcgggggttctaatttctcatcttcaacgccgtctaagaggatgttgacg
cgtgagaaggctatgcttgcgtctttttctccggtgcataatgggcctttaactagagct
cgtcaggctccgagtaatttggtttcggcggcggatggggttaagtcggagcttttgaat
gttgcggtgggtactgatggtggagagaagcctaaggaggaggaagagcttaataaggcg
atccgtgagtgggaggctttggaggctaagatcgaagctgatttcgatgctattagatct
cgtgactgtaatgttcatgtggtgcctaatcattgcggttggttttcatgggaaaaaatt
cacccgcttgaggagcgttcattgccctctttctttaatggcaagttggaaggtcgcact
tctgaggtatatatggaaatacgggattggatcatgaggaagtttcattccaatccgaac
atacaaatagaactaaaagacttaacagaactcgaggttggagactctgacgcaaagcaa
gaggtgatggaattcttggactactggggcttaatcaatttccacccatttccaccagca
gatactggttctacggctcctgatcatgatgatttagaggataaggagtcactgcttaac
agtttatatcgatttcaagctgatgaggcttgccctcctattgtccacaagcctcgtctc
acagcacaagctacaccttcagggttgtttccagatccggtggctactgatgaattgctg
aaacaagagggtccagcagtcgaatatcactgcaattcttgttcagctgattgctctcgc
aagcgctaccattgcccgaaacaggcagattttgacttatgtacggaatgctttaacagt
ggcaagttcagctcagatatgtcatcttctgatttcatactaatggagcctgctgaggcc
cctggcgttggtagtgggaagtggactgatcaagagactcttcttctccttgaagcttta
gaaatcttcaaggaaaattggaatgagattgcagagcatgttgctacaaaaacaaaagct
caatgtatgcttcattttcttcaaatgccaattgaggatgcttttcttgatcaaattgac
cacaaagatccaagcacaaaagacacgacagatttagctgtgtctaaagatgataaatct
gttccaaaagatacacctgaagaggcagagaataagacacgtgttgatgaagatgagact
atgaaagaagttccagaaccagaagttgacaatgaaggaaaagtctctcaggaatcttcc
aaacctgaagaagaaactaatgaagtggaagcagaccagaaaacacccaaactagaaacc
gtcactgatgaaagatgtcaagaggaaactgacgaaaacattgctctgaaatctcttgct
gaagcttttgaagatgttggttattcctccacacctgaagcctcgttctcctttgctgat
ttaggaaaccctgtcatgggactggcagcctttctggtgcgattggcaggatctgatgtt
gctactgcgtcagcccgggcttccataaaatctcttcagagtaattcgggactgttgctt
gctacaagacattgttacattctagaagacccaccagacaacaagaaggattcaactgaa
tctaaaagtgcggatgcagaggataatgatgaaaatgtccataaagatgagcaaccagaa
gaaaaaatccagaaagcagaagacgtctccttgaattcagatgatagggaaatgccagat
actgacacaggtaaagaagatcagaattcagtctctgaagaaaagcaacctggttctcga
actgaaaattctactacaaaaccagatgccgtacaagaaaaaagatctagtaagccagtc
acaactgacagttcagagaaaccagcggatgtaatatgtcaatcacaggacaaatgttca
gggaaggagcttcaagaacctttgaaggatgggaataagctttgtagtgaaaataaagac
gcctctcaagcaactgtctcccagtcagcggcagatgatgcttctcagccagaagcatca
aaagatgtggagatgaaagatacattacagtcagagaaggatcctcaagatgtggtcgaa
acagtaggagaggaggttcaacaggcgaaggaggagggtgcaaaggatgttcttagtact
ccagacacgtctgttgttcagcagcccattggatcagcttctgcaacggaaaatggaaca
gctggtgaaattccaaagaaagaaggaaagaaggagaaggatgtttgtgaagggacaaaa
gacaaacataacatccagaagcttaagcgcgcagctatctccgctatctcagccgcagca
gtaaaggcaaagaatcttgcaaagcaagaagaagatcatatcagacaactttctggatca
ttgatagagaagcagttacataaactagaagcaaagctatctatcttcaatgaagctgaa
agcttgacaatgagggtaagagagcaattagaaaggtcaaggcaacggctatatcatgaa
agggctcagatcatagcagctcgactaggtgtcccaccttcaatgtcctcaaaagcatcg
ttaccaacaaaccgaatcgctgcaaattttgctaatgtaggtccaaggcctcccttgggc
atggcatttccccgcccaccaatgccaaggcctcctccaggtttcactattcctggttct
tttgctgctggtacaacaatggccggaagctcagacccatctccaggttcaaacaatgtt
tcttcggtttag
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