Camelina sativa (false flax): 104730213
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Entry
104730213 CDS
T05044
Name
(RefSeq) crossover junction endonuclease MUS81-like isoform X1
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03440
Homologous recombination
csat03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104730213
03460 Fanconi anemia pathway
104730213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104730213
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104730213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
MUS81-like_WH
EME1-MUS81_C
DUF6429
DUF1495
Motif
Other DBs
NCBI-GeneID:
104730213
NCBI-ProteinID:
XP_010447651
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All DBs
Position
12:4932766..4936784
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AA seq
688 aa
AA seq
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MDDERRAVRCPENQGLAAYVLQKKQEHADKPKGLSENLERTFVKAYRNVCDAKDPINTLK
DLSQIKGFGKWMVKLMKGYFDAGAEGSEQEDLPDNHAGKKANGKKRYIPQRNSVAYALLI
TLHRRTTNGKEFMRKQELIDAADASGLSHAPVGPEKGKGKAGIGNSKREWYSGWSCMTTL
IQKGLVVKSSNPAKYMLTVEGREVAKECIVRSGLPNSVDILSDDEMDPAPQAKKTPNQNP
TCSFTLTEEQLYADPRSRAQAAIPNDILEKFTPFGYSKEQVVAAFREVSDGSGDKDPSTL
WLSVMCHLRQAEVYNSCPDSRNKRKDSGGPSGAQTRQVDLEGSLAKKFRSCNDGFTLNPC
SSSSSHAVKACSSSLVSDRTKGITNFPRLPPLRCEETFEEAYDVILILDDREKFATKGSR
SRNIVDNICSEFNIKIEVRRLPVGDCIWIARHKYLEDEYVLDFIAERKNVDDMRSSIRDN
RYRDQKLRLQRSGFKKLIYILEGDPNHSDAAESIKTACFTTEILEGFDVVRTQGLGETLR
KYGYLTKSIYQYYKLRVNDNDKSKVAASCPSFDSFVKRCQDLDKMTISDVFAIQLMQVLS
LAMHFSVLICEWFCESISIDKYLVQIPQVTEEIAMAVLDMYPTLISLASAYSHLEGDVFE
QEEMLRNRSYNVICASASKNIFKLVWGE
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgagagacgggccgtacggtgtcctgagaatcaaggtttagcggcttatgtg
ttgcaaaagaagcaagaacacgctgataagcccaaaggcttgtctgagaatctggagagg
acgtttgttaaggcgtatagaaatgtctgcgacgccaaggatcccattaacacactcaaa
gacttgtcgcagatcaagggctttggcaagtggatggttaagctcatgaaaggatatttt
gatgctggtgctgaaggttctgagcaagaagatttacctgataatcatgctgggaaaaag
gccaatggaaagaaacggtacattccgcaaagaaactctgtggcgtatgcattactaata
accttgcacagaaggacaacaaatgggaaagaattcatgcgtaaacaagagcttattgat
gctgctgatgcgagtgggctctcacatgctcctgttgggccagagaaaggcaaagggaaa
gcaggaattggaaactctaagagggagtggtatagtggatggagctgtatgaccacactt
atacagaagggattagtggtcaaatctagcaacccagccaagtacatgctgacagttgaa
ggtcgggaagttgcaaaggaatgtatagtgcgatctggattacctaattcagttgacatc
ttatctgatgatgaaatggatcctgcaccgcaagcaaagaaaacaccgaatcaaaatccc
acctgttcttttacgttgacagaagaacagctatatgctgatcccagatctagggcacaa
gcagccattccaaacgatattcttgaaaagtttacaccgtttggttattctaaggaacaa
gtcgttgctgcattcagagaggtttcagatggatctggggacaaggatccatcaactctc
tggctctctgtaatgtgccatcttcgtcaagcagaggtttataattcctgtccggactct
cgaaataaaagaaaagattcaggaggaccttctggagcacaaactcgtcaagttgatctt
gagggatctcttgctaagaagtttcgctcttgcaacgatggattcaccttaaatccatgt
tcatccagttcaagtcatgcggtgaaagcctgctcatcttctttggtatcagatagaacc
aaagggataacaaattttccacgcctccctcctcttagatgtgaagaaacgtttgaggag
gcatatgatgtgatcttgatactggatgatcgagaaaagttcgccactaagggatcacgg
tccaggaatatagttgataacatatgctctgaattcaatatcaagattgaggttagacga
ttaccagtcggggattgtatctggattgctcggcataagtaccttgaggatgagtatgtt
ctggattttattgccgagaggaagaatgttgatgatatgcgctcatcaattagagataat
cgctacagggaccaaaaactcagacttcagagatcaggattcaagaagctgatatacatt
cttgaaggagatccaaaccattctgatgcagcagaaagcattaaaacggcttgtttcacg
acagagattctggagggatttgatgttgtgaggacacaagggctgggtgagacgctaaga
aaatacggttacctcactaaatcaatatatcagtactacaagttacgggtgaatgataat
gacaagagcaaagtggcggcctcgtgtccttcttttgatagttttgtcaaaaggtgtcaa
gaccttgataaaatgacaatcagcgacgtatttgccattcagcttatgcaggtactgagt
ctggctatgcatttttcggttcttatatgtgaatggttctgcgaatccatttcgattgat
aagtatttggtgcagatcccgcaggtaactgaggaaattgccatggctgttcttgatatg
tacccaacacttatatctcttgcttctgcctattctcatctagaaggggatgtctttgag
caagaagagatgttgagaaatcgaagctacaatgtaatatgtgcatcagctagtaagaat
atattcaagttagtttggggtgaatga
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