Camelina sativa (false flax): 104730313 Help Entry 104730313         CDS       T05044                                  Name (RefSeq) probable helicase MAGATAMA 3   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism csat  Camelina sativa (false flax) Brite KEGG Orthology (KO) [BR:csat00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:csat03021]     104730313 Enzymes [BR:csat01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      104730313     5.6.2.5  RNA 5'-3' helicase      104730313 Transcription machinery [BR:csat03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      104730313 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_12 AAA_11 AAA_30 AAA_19 UvrD_C_2 AAA_16 Motif Other DBs NCBI-GeneID:  104730313 NCBI-ProteinID:  XP_010447770 UniProt:  A0ABM0UXG6 LinkDB All DBs Position 12:complement(5471323..5478149) Genome browser AA seq 1332 aa AA seqDB search MASEGKLFFDLNELPTEDDDGNDNVNFNQPQTAIPSANPNTSGLLATPSSSQDNVNSRVF SHASTVSDVNNRLFSHASTVSGFQPFVRPISAQRTDVSVEQKMDENSLKESLSSSRPDTL EEAKVAPSIVPDDAGAPEREEGEWTESEVPASENVHSSSEYSRVTEKDNGTVGLDINSNL GLQNRNVNHISESSGKDSASIDSPQEQGLMVRQRETKGVEASHAIKCANTTVKRKMDHQK ETMLGKKRNRQTVFLNLEDVKQAGPIKTTTPRRQNFPQPIVTRTVRESRAGPPPAEQGGG VPGHVVYRDQKLSDIPNGGVHPETSELKLESNGESQSGSVGKTRRTNGEAGPSAEGSVSR QGSWKQPMNSRQPKSSHSSNRQVTLSSQTSADSKFGNKKFTSFKKQANSTQYQDTSVERL IREVTNEKFWHHPEDSDLQSVPERFESMDEYVRVFEPLLFEECRAQLYSTWEELAEANSY MKVRIKFIERRERGWYDVILLSVNDCKWGFKEGDVAVLSNPVPESEGEHDDAGRVAGTVR RYIPVDTRDPPGAILHFYVGDTYDSGSKIDDNHILRKLKPKEIWHLSVLGSLATTQREYV ALHAFSQLNPQMQNAILRPSPEQFPNYGEQTPTVPDCFTPSFAGHLHRSFNAPQLAAIHW AAMHTAAGTSSGVKRQDPWPFTLVQGPPGTGKTHTVWGMLNVIHLVQYQQYYTSLLKKLA PESYKQVSESSSDHIVSGSIDEVLQNMDQNLFRTLPKLCAKPRMLVCAPSNAATDELLSR VLDRGFIDGEMRVYRPDVARVGVDTQTRAAQAVSVERRSEQLLAKSRDEILGHMHNLRLR ETQLSQDIAGLKRELTAAAFANRSQGSVGVDPDVLMVRDQTRDALLQRLSAVVEARDKDL VEMSRLLIVEGKFRAGGNNFNLEEARASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFD MVVIDEAAQASEVGVLPPLALGAARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQLA GCPTLLLTVQYRMHPQIRDFPSRYFYQGRLTDSESVSAAPDEIYYKDSVLKPYLFFDISH GRESHRGGSVSYENIDEARFCVGVYLHLQRTLKSLGGGKVSVGVITPYKLQLKCLKIEFA NALGQDELKEIYINTVDAFQGQERDVIIMSCVRASNHGVGFVSDIRRMNVALTRAKRALW VMGNASALMKCEDWAALITDAKARNCFMEMESLPKDFPVPKVPSFIPKAPNARGFRSGGP RTRSIEMHPESRSGTPSEDDEKLSTTTFPRNGNIRRENSVDDSDLPGDRYRDAWQHGIQR RQNFGRPLGRRD NT seq 3999 nt NT seq  +upstreamnt  +downstreamnt atggcttcagaaggaaaattgttctttgatcttaatgaacttcctacagaggatgatgat gggaatgataatgttaacttcaatcagccacagacggctatcccatctgcaaaccccaat acatctggcttgcttgcaactccgtcgtcctcccaagacaatgtaaacagccgagtgttc tcacatgcatcaacagtttctgatgtaaacaaccgactgttctcacatgcatcaacagtt tctggttttcaaccttttgtccgacctatctctgcccaacgcacggatgtctcagttgaa caaaagatggatgagaactctcttaaggaatcattgtcatcatcaaggccagacacattg gaggaagcaaaggttgcaccatcaatagtacctgatgatgccggagcacctgagagagaa gaaggggaatggacagagtcggaggttcctgccagtgagaatgtacatagtagttctgag tattctagagttacagagaaggataatggcacagtaggattagatatcaactcaaacttg ggtcttcaaaacagaaacgtcaatcatatttcagaaagcagtggtaaagatagtgcatct atagatagtccgcaagaacagggtttaatggtgaggcagagagaaactaaaggagttgaa gcaagtcatgcaatcaagtgcgcaaataccactgtgaagcgaaagatggatcatcagaaa gagacgatgttgggaaagaagcggaacaggcagaccgtgtttctcaacctagaagatgtc aagcaagctggtcctattaagaccacaacacctagaagacagaatttcccacaacctatt gtcacgcggacggttagagaatctcgcgcaggtcctccacctgctgaacaaggaggcggg gttccagggcatgttgtataccgggatcagaaactgagtgacattcctaatgggggagta catccagaaacatctgaacttaaattagaatctaatggtgaatcacaatctgggtcagtt ggtaaaactaggagaacaaatggggaggcaggaccttctgctgaaggttctgtgtcaagg caggggtcatggaagcagccaatgaattcgcggcagccgaagagtagccattcgtcaaat agacaagtcaccttgtccagtcaaacttctgcagactcaaagtttggaaacaagaaattt acttcgttcaagaagcaagccaatagtacccaataccaagatacctccgtggagcgtctt atacgagaggtgaccaacgaaaagttttggcatcatccagaggattctgatctccagagt gtccctgagcggtttgaatccatggatgagtatgttagagtgtttgaacctttacttttc gaggagtgccgggcacaactttacagtacatgggaagaattggctgaggcaaattcatac atgaaggtcagaataaagttcatcgaaagaagagagagaggatggtatgatgtgatactt ctctcagtaaatgattgtaaatggggtttcaaggagggagatgttgcagttctttcaaat cctgtgcctgaatcagaaggagagcatgatgatgctggacgtgtagctggtacagttagg agatatataccggttgatactcgagatcctcctggagcaattctccatttctatgttgga gatacttatgattctggcagcaagattgacgataatcatattttacggaagcttaaacct aaggagatctggcatctgtcagtgcttggttcgcttgcaaccacacaaagggaatatgtt gctttgcatgcgttttctcagcttaacccacagatgcaaaatgcaattctcaggcctagc ccagagcagtttcctaattacggggagcagactcctacagtgcccgattgttttactccg agctttgctggccacttacatagaagctttaatgctcctcagttggctgcaatccattgg gccgcaatgcatactgcagctggtactagcagtggggtaaagaggcaagatccatggcca tttactcttgttcaaggccctccaggaacaggcaagacacacacagtttggggaatgttg aatgttatccatttggttcagtatcagcagtattacacttcgttgctgaagaaattagct cctgaaagttataaacaagtaagtgagagcagttcagatcatattgtgtcaggatcaatt gatgaagtcctacaaaacatggaccagaatctatttcgtacgctgccaaaattgtgtgct aaaccaagaatgctcgtttgtgctccttcaaatgctgcgaccgatgaacttctctcacgt gtccttgatcgtggttttattgatggggaaatgagagtttatcgccctgatgtggctaga gtaggtgttgatacccaaacgagagctgctcaagctgtttctgtggagcgtagaagtgag cagctattagccaagtcccgtgatgaaattctaggacacatgcacaacctcagattacga gaaacgcagctatctcaagatattgctggacttaaaagggaacttactgctgcagccttc gctaaccgttctcagggatccgttggcgttgaccctgatgttcttatggttagggaccag acaagagatgcattgttacagcgcctttctgctgttgttgaagccagagataaagatctt gttgaaatgtctcgccttctcattgtcgagggaaagtttcgcgctggtggtaataacttt aatcttgaagaagctcgtgcaagtcttgaggcaagtttcgcgaacgaggctgaaattgtt tttacaactgtatcaagcagtggtcgtaaactgttttctcgtcttacgcatggcttcgat atggtggtcatcgatgaggctgcccaagctagtgaggttggagttcttcctccccttgct cttggtgctgcacgatgtgtacttgtgggtgatcctcaacagcttcctgctacagttatt agcaaagccgctggaacccttttatacagtagaagtctctttgaaaggtttcagttagca ggttgtccaactttgttgttaacagttcaatataggatgcatcctcaaatacgtgatttc ccttcaagatatttctaccaaggacgcctcacagacagtgaaagtgtttccgctgctcct gacgagatttattacaaagattctgtccttaagccttaccttttctttgatatcagccat gggcgggaatctcatagaggtggatcagtatcttatgagaacattgatgaagctcgcttt tgtgttggggtgtacttgcatcttcaaagaactctgaagtcattgggtgggggtaaagtc tctgttggggtcataaccccatacaaactgcagttgaaatgcctgaaaatcgagttcgca aatgctttgggccaagatgaactgaaagagatttatatcaatactgtagacgcgtttcag ggtcaagaacgtgatgttataattatgtcatgtgtgcgtgcttccaatcacggtgttggc tttgtctctgatatccggcggatgaatgttgctctcacccgtgccaaaagagctctatgg gtcatgggaaatgcatctgctctaatgaagtgcgaagattgggcagcactgatcactgac gccaaagcaaggaactgttttatggagatggagtctcttcctaaggatttcccggttcca aaggtacctagctttatcccaaaagcacctaatgctagaggtttcagatcaggtgggcca agaaccagatccatcgagatgcaccctgaatccaggtcagggacaccatcagaagatgac gagaagctgagcacaacaacatttccaagaaatgggaatattcgaagggagaactcagtt gatgattctgatctgcccggggatagatatagagatgcttggcaacatgggatccaaagg aggcaaaattttggacggcctttagggagaagagactaa

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