Camelina sativa (false flax): 104730341
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Entry
104730341 CDS
T05044
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 1-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104730341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104730341
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
104730341
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GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
104730341
NCBI-ProteinID:
XP_010447806
UniProt:
A0ABM0UXJ9
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Position
12:5625654..5627370
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AA seq
224 aa
AA seq
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MGEEARALDMATSEENTTTTRNHTVHDLMMVDLYPLSSYYFGSRDALRVKDEIISDRVIR
LKSNYAAHGLRTCVEAVLLVELFKHPHVLLLQYRNSIFKLPGGRLRPGESDIQGLKRKLG
SKLSINENVLVPGLGVGECIGMWWRPNFETLMYPFLPPNVKHPKECSKLFLVRLPVHQQF
VVPKNFKLLAVPLCQLHENEKTYGPIISQIPKLLSKFSYNMMEI
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaagaagctcgagctttagatatggcaacaagcgaagagaacacgacgacgaca
cgaaaccatactgttcatgacttgatgatggttgatttgtacccactaagcagctactac
tttggttcgcgagacgctcttcgcgtcaaggacgagattatctctgatcgagtcatcaga
ttgaaatcaaattatgctgctcatggattgaggacttgcgttgaagctgttcttctggtt
gagttgtttaagcatcctcatgttttgcttcttcagtatagaaactccatcttcaagctt
cctggtggtcgtttaagacctggagaatcagatattcaaggtctgaaacggaaactagga
tcaaagctttctattaatgaaaacgtccttgttccgggtttgggggtaggagaatgcatt
ggaatgtggtggagacccaactttgagacattgatgtatcctttcttgccacccaatgtg
aaacatccaaaggaatgctcaaagctttttcttgttagattaccggtacatcaacagttt
gtcgtcccaaaaaacttcaaactccttgctgttccgttgtgccaacttcatgaaaatgaa
aagacttatgggccgatcatatcgcaaattcccaagctactttcgaaattctcatacaac
atgatggagatatga
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