Camelina sativa (false flax): 104730352
Help
Entry
104730352 CDS
T05044
Name
(RefSeq) WD-40 repeat-containing protein MSI5-like
KO
K10752
histone-binding protein RBBP4
Organism
csat
Camelina sativa (false flax)
Pathway
csat03082
ATP-dependent chromatin remodeling
csat03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104730352
03083 Polycomb repressive complex
104730352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104730352
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
104730352
Histone modification proteins
HAT complexes
HATB complex
104730352
HDAC complexes
Sin3A-HDAC complex
104730352
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
104730352
PRC2.2
104730352
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
104730352
Heterochromatin formation proteins
Other heterochromatin formation proteins
104730352
Chromatin remodeling factors
NuRD complex
104730352
NuRF complex
104730352
NuRF complex (fruit fly)
104730352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_LRRK2
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
104730352
NCBI-ProteinID:
XP_010447816
LinkDB
All DBs
Position
12:5695344..5699203
Genome browser
AA seq
490 aa
AA seq
DB search
MESEEAAATVQATRPRRRVSRTPVTAIVPKTRVRKPKKNEESSQSPFSQQQSHKATVEDK
FSQWKALVPILYDSFANHALVWPSLSCRWGPELQQAASKTQRLYLSEQTNGSVPNTLVIA
NCEAVNRQLNEAAHSPLVKKYKTIIHPGEVNRIRELPQNNKIVATHTDSPNVLIWDTETQ
ADRYAVPGAPNSCPDLLLTGHQDNAEYALAMCSTEPFVLSGGKDKSVVLWNIQDHITMAS
TDSKSPGSSFKQTGEGGNKTDCPSVGPRGVYHGHEDTVEDVAFCPSSAQEFCSVGDDSCL
MLWDARTGTNPATKVEKAHDADLHCVDWNSHDNNLILTGSADNTVRVFDRRNLTSNGVGS
PVYTFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNLWDYDRVGKKSERAPKSPDGLFFQH
AGHRDKVVEFNWNVLDPWTIVSVSDNCESSGGGGTLQIWRLSDLIYRAEEEVLTELEKFK
SHVFTCTSKP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgaagaagctgctgcgactgttcaagccaccaggccgagaagaagagtatcc
aggactccggtgacggccattgtgccgaagacgagagttcgtaaacccaagaaaaatgaa
gagtcttctcagtcaccgttttctcaacagcagagtcacaaggccactgttgaggacaag
ttctctcagtggaaggctcttgttcccattctctatgattcgtttgccaaccatgccctc
gtctggccctctctctcttgcagatggggtccagagcttcagcaagcagcttcgaagact
caacgtctctatctctcggaacaaactaatggcagtgtgcctaatactttggtcatagcc
aattgcgaagctgttaatagacagcttaatgaagcggctcactctccgttggtgaagaag
tacaagaccatcatccaccctggagaggtcaacagaatcagggaactcccgcaaaataac
aagattgtagctactcacaccgacagtcctaatgttctcatttgggacactgagactcaa
gcagaccggtatgctgttcctggagctccaaattcttgtccggatttgttactaactggg
catcaggataatgctgaatatgctcttgcaatgtgctcaaccgaaccttttgttctctct
ggaggcaaggacaagtccgttgttttgtggaatatccaagatcatatcacaatggctagt
acggattccaaatcgcctggatcaagcttcaaacagactggtgaaggtggtaataaaact
gattgtccttctgttggccctcgaggcgtatatcatggccacgaggatacagttgaagat
gtggcattctgtccatctagtgcacaggaattctgcagtgttggtgatgattcttgccta
atgctatgggacgcaagaactggcactaatcctgccacgaaggttgagaaggcacatgat
gctgatcttcattgcgtcgattggaattctcatgacaacaatttgatcctgacagggtca
gcagataacactgtccgtgtgtttgaccgccgaaacctgacctctaatggagttggttca
cctgtctacacatttgaaggccacaaagctgctgttctttgcgttcagtggtctcctgat
aaatcatctgtgtttgggagttccgcagaagatggtctcttgaacctttgggattatgat
agggttggtaagaagtccgagcgtgcacccaaaagtcctgatggacttttctttcagcat
gctggtcacagggacaaagtggtcgaattcaactggaacgtattggacccttggactatt
gtcagtgtttctgataactgtgagagtagcggtggaggtggaacattgcagatatggcgg
ttgagcgacttgatttacagagcggaagaggaagtcttaacagagctagaaaagttcaag
tcacatgttttcacatgtacctctaagccttga
DBGET
integrated database retrieval system
