Camelina sativa (false flax): 104730626
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Entry
104730626 CDS
T05044
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104730626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104730626
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104730626
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
104730626
NCBI-ProteinID:
XP_010448125
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Position
12:complement(7112160..7114316)
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AA seq
256 aa
AA seq
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MSAKPGAATPTYSPKVVGRSRLPIFKDSDLDWSRPDGRGFPQCRPALLQTGAVSSASGSA
YAEFGNTKVIVSVFGPRESKKAMTYSDVGRLNCNVSYTTFASPTLGQGTDHKEYSSMLHK
ALEGVIMMETFPKTTVDVFALVLESGGSDLSVVISCASLALADAGIMMYDLITAVSVSCI
GKNLMIDPVTEEEGCEDGSFMMTCMPSRYEVTQLTVTGEWTTPNINEAMQLCLDACLKLG
EIMRDCLKQAASASDE
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaaaacctggagccgcgacgccaacgtattctcctaaagttgtgggaagatct
cgacttcctatattcaaagactccgacctcgattggtcccgtcctgatggccgtggcttc
cctcaatgccgacctgccttgcttcaaactggtgctgtgagctctgcttctggttctgct
tatgctgagtttgggaacacaaaagtcattgtttcagtatttgggccaagggagagtaag
aaagctatgacttatagtgatgttggtagattgaattgcaatgttagctatactactttt
gcttccccgactcttggccagggaactgatcataaagagtactcatcaatgcttcacaaa
gccttggaaggcgtaataatgatggagacttttccaaagactactgttgatgtttttgca
ttggtgcttgaatccggaggcagtgacctctctgttgtgatttcatgtgctagtcttgct
ctagctgatgccgggattatgatgtatgaccttatcacagctgtttcagtgtcttgcata
gggaaaaaccttatgattgacccggttacagaagaggaaggatgtgaagatggaagcttt
atgatgacgtgcatgccatctcgttatgaagtcactcagctaaccgtcacgggtgaatgg
acaacgcctaatatcaacgaggcaatgcagctttgcttggatgcttgtttgaaacttgga
gagatcatgcgggattgtctaaaacaggctgcctcagcttcagatgaatga
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