Camelina sativa (false flax): 104731119
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Entry
104731119 CDS
T05044
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104731119
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
90S particles
Other 90S particles
104731119
Pre-60S particles
Other pre-60S particles
104731119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
Adaptin_N
HEAT_2
NopRA1
RIX1
Motif
Other DBs
NCBI-GeneID:
104731119
NCBI-ProteinID:
XP_010448691
LinkDB
All DBs
Position
12:9708546..9714505
Genome browser
AA seq
1130 aa
AA seq
DB search
MAASEDRADENDEISFKDGNTDISQQLMDRYGKSSASQHRHLVATAVAMRSILTSESLPP
SPPAFFAAAISSVDSSTEDPMAVSALLTFLSIVLPLVPSGEISATMARDAVAVLVNPIDG
GVDKLGVASLRAGVKCIGTLLIGFCDLDHWESLQIGFGLLLKFAIDKRPKVRRCAQECLE
KLFGSLQSSTVVKEASNTVYALLKEYKPVLSDLSSKKIDEGAKVDSTMRSEDAEAAHVLN
VLSATIPFLSAKVSSRVFSELCKLMGSQFSPLTRQILKAIDTIFKNSEDTTVVPEIEGLV
TSLTSYLSLHDKNPADTIVHVTTLLKSALEKAYSVEPTLCLKKLPLVCGSLAGLLTSTDD
VASQASVILKDLISSHIDTNELLIEGSLSCEDEDNVTSGDDINAAMSVCSVFQSALNSCD
GIPKEHILTVINLLIEKLGERSYILAKNIILKLADLMEHATGDMSSSQYLQQCIGSAVVA
MGPVRLLELLPITLHAESHSCTNAWLIPVLRKYIIGASLEYYVDHIVPLAKSLMLASKGA
KKSAHGKELRAYGHELLRLLPAFCNYPVDVHQQFGSLAKLMVKFIKNKSFMHEAVALSLQ
ILVNQNKRMPKPSTDMDEATAISEDATTELESRFHYSKKASTKNMKALASSSTELLQTLV
DVFTASDTEISADFKAAIGCLASTLDSSVRKKILISLLNKFDPAGESETEGKVNQSNDSI
DEEKETCSATKTQLKRSAVLDLASSFVEGAQEDLIELIYNLVRQSFQATDEADLCGAYDT
LSRVLQEHGSFCSSHFAEVIEMLLSHKTPEDAASSISRFACLHVLMAHGIQSSTEEENEK
AFLILNEIILTLKDGKEEHRKAACDALVMVYTTLKNSSSISSDELCPKLINMITGYIDGS
SPHIRSGAVSALSALIYKDPEICLSSPEILSSVLSLLHTKSIEIIKAVLGFVKVLVSTSQ
AQDLQSLLQNLLYEILPWSSVSRHYFKSKVTIIVEIMVRKCGTRAVQLATPDKHKSFIQT
VLENRSGKSRDKEETNDSQTTSTDPSREPRKRNYREASSETTAKQDGNKFKRQKGTHQRH
TPASDISGSRTGQQRYGNRSFGKHREASGNNHKSGKDTRKPQKNRFRKAQ
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctctgaagacagagcagatgaaaacgatgaaatttccttcaaagatggcaac
actgatatctcccaacagcttatggaccgttacggcaagtcctcagcctcgcagcaccgt
catctcgtcgccaccgccgtcgctatgcgctccattctcacctctgagtctcttccgccg
tctcctcctgctttcttcgcagctgctatatcctcagtggattcttccacggaggacccc
atggcggtttctgctttgcttactttcctgtccatagtccttcctctggttccttcagga
gaaatttcagctactatggctcgagatgctgtagctgttttggtaaacccaattgatggt
ggggttgataaattaggtgttgcgagtttgagagctggcgtgaagtgcattgggactttg
cttattggtttctgtgatttggatcattgggaatctcttcaaattgggtttggtttactt
ctcaagttcgccattgataaacgtcccaaggttagaagatgtgctcaagagtgtttggag
aagctatttggttctctacaatcatctactgttgtaaaggaagcaagtaatacagtttat
gctttacttaaagagtataagcctgttctatctgacttaagctcaaaaaagattgatgag
ggtgctaaggttgactcaacaatgaggtctgaggacgcagaggctgcccatgtgctaaat
gtgctcagtgctactattccgtttctctctgccaaagttagttctagagttttttcggaa
ctttgtaagcttatgggttctcagttttcgccgttgacgaggcaaattctcaaagcgatt
gacactatcttcaagaattcagaagatacaactgttgttcctgagatagaaggacttgta
acttctttgactagttatttatctttacacgacaagaatcctgctgacacgatcgtgcat
gtgaccaccctattaaaaagtgcgttggagaaagcctactcagtcgaaccaacattatgt
ctaaagaaacttccgctagtttgtgggtcattggcaggccttttgacttccacggacgac
gttgcatcccaagcctcagttatattaaaagacttgatcagtagccacatcgatacaaat
gaacttctaatcgagggaagcttgtcttgtgaagatgaggataatgtaacgagtggggac
gatataaatgcagcaatgtctgtatgctctgtctttcagagtgccctaaactcatgtgat
ggaattccaaaggagcacattttaactgtcataaatcttttgatcgagaaacttggagag
cgttcatatattcttgcaaagaatatcatattaaagcttgctgacttgatggaacatgca
actggagatatgtctagctcacaatatcttcagcaatgcattgggtctgcagtggttgca
atgggaccagtaaggctactggaacttcttcctatcactcttcatgctgagagccactca
tgcacaaatgcttggctaattcctgtcttaagaaaatatatcattggagcatctcttgag
tattatgtcgatcacattgttccacttgcaaaatcactgatgcttgcttctaaaggagct
aaaaagtcagctcacggcaaagagttgcgggcctatggtcatgaacttctgagactgtta
cctgccttctgtaactatccagttgatgtgcaccaacaatttggatcgttggccaaactg
atggttaaatttattaaaaataaatctttcatgcatgaagccgtggccctttctctacag
atccttgtaaatcagaataaaagaatgcctaagcccagtacagatatggacgaagcaaca
gccataagtgaagatgcaacaacagaactggaaagtagattccactattcgaagaaagct
tcaacgaaaaacatgaaggctttggcatcaagctcgacagagttgcttcagactcttgtt
gatgtattcactgcttcagacacagagatcagtgcagactttaaggctgcaattggatgc
ttagcttctactctggattcgtcagttaggaaaaagattctaatttctttgctaaataag
tttgatcctgctggtgaaagcgagactgaggggaaggtcaatcaatcgaatgattcaatc
gatgaagaaaaagaaacctgcagtgccacaaagacacagttaaagaggagtgctgtgctg
gatcttgcatcttcatttgttgaaggagcccaggaagaccttattgagttgatttataat
cttgttcgccaaagttttcaggccaccgacgaggctgatctttgtggggcatatgatact
ctgagcagagttctacaggaacatggttcgttttgttcatctcattttgcagaggtgata
gagatgttactcagccataaaactccagaggatgcagcgtcttctataagtcgatttgca
tgtctccacgttctaatggctcatggaattcagtcaagcaccgaggaggagaatgagaaa
gcgttccttattctgaacgagataatcctgacacttaaagatggcaaagaagaacatagg
aaagcagcttgtgatgcactggttatggtatataccaccctgaaaaattcatcctctatc
agcagtgatgaactttgtcccaaattgattaacatgataacgggttatattgatggatca
tcgccgcacataaggagtggagcagtgtctgcattatctgctttgatatacaaagaccct
gagatctgcctatcgtcacctgagattctttcatctgttttatcgttgcttcacaccaaa
tccattgagattataaaagctgttttgggttttgtgaaagttttagtctcaacatcgcaa
gcccaggacttgcagagtctactgcagaacctcttatacgaaattctcccctggtcgtct
gtttcgagacactattttaagtcaaaggtaacgatcatagttgagattatggtaaggaag
tgcggcacccgcgcagtccaattagccacaccagacaagcacaagagtttcatccagaca
gttttagagaaccgttcggggaaatcgagagacaaagaagagaccaatgattcacagact
acatccactgatccatccagagagccgcggaaaagaaattacagagaagcttcatcagaa
actacagccaaacaagacggcaacaaattcaaacggcaaaagggaacacatcaacgacac
acacctgcttccgacattagtggaagtagaacaggacaacagcgttatggtaacagaagc
ttcggaaaacatagggaagcttctggaaacaatcacaagtcaggaaaagatacacgaaag
ccacagaagaacagattcaggaaagcacaatga
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integrated database retrieval system