Camelina sativa (false flax): 104731273
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Entry
104731273 CDS
T05044
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104731273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104731273
Spliceosome [BR:
csat03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
104731273
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
104731273
NCBI-ProteinID:
XP_010448901
UniProt:
A0ABM0V0B4
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Position
12:11144583..11148012
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AA seq
530 aa
AA seq
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MKSEREVKNGVTEEEREVKRKRSDSPPPPLGFNNPLLPLANAYDDDDEDEENEQKKSQTR
GVVKGEGNGNKDNDEDDDDDDDAFKGRGKRSRQVEVRRDCPYLDTVNRQVLDFDFERFCS
VSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLEADHHVYINLLTEKVYCLPDSYEINDPS
LDDIRHVLNPRFSRAQVEELDKNRQWSRALDGSDYLPGMVGLNNIQKTEFVNVTIQSLMR
VTPLRNFFLIPENYQHCKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFR
IGQQSDPVEFMSWLLNTLHMDLRPSKDASSIIHQCFQGELEVVKEYQGNENKETSRMPFL
MLGLDLPPPPLFKDVMEKNIIPQVALFDLLKKFDGETVTEVVRPKLARMRYRVTRSPPYL
MFHMVRFKKNNFFKEKNPTLVNFPVKDMELRDYIPSLPTAPEGEKVCSKYNLIANIVHDG
KPEDGYFRVFVQRKSQELWYEMQDLHVAETLSQMVELSEAYMQIYEQQEK
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtgagagagaagttaagaatggtgttactgaggaagagagagaggtgaagagg
aagaggtctgattcgccacctccaccactgggttttaataaccctcttttgcccttggct
aatgcttacgatgacgacgatgaggatgaggagaacgagcagaagaaatctcaaactcgt
ggagttgtaaaaggagaagggaacggtaacaaagataacgacgaagatgatgatgatgat
gatgatgcctttaaggggagaggaaagcgttcacgccaagttgaagttcgtcgtgactgt
ccttatcttgatactgttaatcgccaggtgttggattttgatttcgagaggttttgttct
gtgtccttgtcaaatttgaatgtgtatgcgtgtctcgtctgcggtaagtatttccaaggg
aggagccagaagtctcatgcttatacgcatagtttggaagcagaccaccacgtttacatc
aatcttctgacggagaaggtttactgtcttcctgatagttacgagatcaatgacccttct
ttggatgacattcgtcatgttttaaatccaaggtttagtagggctcaagtagaagagctc
gacaagaataggcagtggtctagggctcttgatggctctgactatcttccgggaatggtg
ggtttgaacaacatacaaaagacggagtttgtgaatgttacaatccaatcgttgatgaga
gttactcctttaaggaacttcttcctcattcctgagaattatcagcattgcaagtctcct
cttgttcaccgttttggagaactcactcggaagatttggcatgctcgaaactttaaagga
caggtgagtccacatgaattcttgcaagctgtcatgaaggccagtaagaaacgatttagg
ataggccaacagtcagatcctgtagagtttatgtcgtggctcctcaacactttgcacatg
gatcttaggccttcgaaggacgccagcagtatcatccaccagtgcttccagggtgagttg
gaggttgtgaaagagtatcaaggcaatgaaaacaaagaaacctccaggatgccttttctg
atgcttggactagatttgccaccgcctcctcttttcaaagatgtcatggagaaaaacata
attccgcaggttgctctatttgatttattgaagaagtttgatggagagactgtgacagag
gtggttcgcccaaagctagccagaatgagatatcgtgtaaccagatcgcctccttacttg
atgttccatatggttcggttcaagaaaaataactttttcaaggagaagaacccaaccctg
gttaacttcccggtgaaggacatggagttgagggattacataccatcattgcctacagcc
ccagaaggcgagaaggtgtgctcgaagtataatctaatcgctaacattgtacatgatggt
aagcctgaggatgggtacttcagagtctttgtgcagaggaagtcacaagaactatggtac
gagatgcaggatttacatgttgcagagacactttcccaaatggtagaactatcggaagca
tacatgcagatatatgagcagcaggagaaatag
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