Camelina sativa (false flax): 104731686
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Entry
104731686 CDS
T05044
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104731686
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
90S particles
Other 90S particles
104731686
Pre-60S particles
Other pre-60S particles
104731686
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_Prp19
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_Aladin
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
EIF3I
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_WDR75_1st
NBCH_WD40
WD_LRWD1
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_WDR75_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
104731686
NCBI-ProteinID:
XP_010449447
UniProt:
A0ABM0V1K4
LinkDB
All DBs
Position
12:complement(14178766..14182254)
Genome browser
AA seq
501 aa
AA seq
DB search
MITAVSWIPKGNLKAVPDVAEPPSKEELKELIESGAFARSVDGSNEDEEEIAEDGEEISE
VDRAKAVAEAFGKSSKSKIASSSMEVDEVAEGLKELDMDNYDEEDDGIELFSSGIGDLYY
PSNEMDPYLKDVEDEDDEEDIDDTTIKPTDSVIICARNEDEVSHLEVYVYEESSGSPNMY
VHHHIIIPEFPLCTAWIDCPLKGGEKGNFVAIGSKESPTIEIWDLDVRDEVLPCIQLGGK
EEMLVTKKKKSKKVKSKKEKSKKQKYKEGSHTDSVLGLAWNKEFRNILASASADKKVKVW
DVATGVCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVLKDGRQPSHSGFKWSVMSD
VESLAWDPHSEHSFVVSLEDGTVKGFDIRTAQSGSDSDLKPSFTIQAHDQDKGVSSISYN
ISAPNLLATGSMDKTVKLWDLTNNEPSCLALHKPKAGAVFSISFAVDNPFLLAIGGSKGE
LHVWDTLLDADVCRKYGSKRS
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgataactgcagtgtcatggataccaaaagggaacctaaaagctgttcctgatgtagct
gagcctccttcaaaggaagaactcaaagagcttattgagagtggagcttttgctagaagc
gtggatggtagtaatgaggatgaagaagagattgcagaggatggagaagagattagtgaa
gttgatcgtgccaaggctgtagctgaagcgtttggtaagtcttctaaaagcaagattgct
tcttcttcgatggaggttgatgaggtagctgaaggattgaaagagcttgacatggataat
tatgatgaagaggatgatggaattgaacttttcagttctggaatcggggatctttattat
ccaagtaatgagatggatccatatctgaaggatgttgaagatgaggatgacgaagaggat
attgatgacacaacaatcaagccaaccgattcagtgattatctgtgcgaggaatgaagat
gaagtcagccatctagaggtttatgtatacgaggaatcatctggctctccaaacatgtat
gttcatcatcacataattataccggagtttccattgtgtactgcatggattgattgtcct
cttaaaggaggggaaaaagggaattttgtagctattggttcaaaagaatcaccgacgatc
gagatatgggatcttgacgttagagacgaggtgctaccttgtatacaactaggaggaaaa
gaggagatgttagtgactaagaaaaagaagagtaagaaagttaagagtaagaaagagaag
agtaagaaacagaaatacaaagaaggtagccatactgattcagtacttggtcttgcttgg
aacaaggagtttaggaacatacttgctagtgctagtgccgacaaaaaagttaaggtctgg
gatgtggctactggagtatgtaagattacgatggagcatcacacaaaggaggttcaagcg
gttgcttggaaccattatgctccggaagtgcttctcagtgggtcgtttgatcaaactgtt
gtcttgaaagacggaagacaaccttcacactcgggtttcaaatggtctgtcatgtctgat
gtcgaaagcttagcctgggatcctcatagtgaacactcctttgtggtaagtcttgaagat
ggaaccgtgaaaggttttgatatacgtacagcacagtcaggttcagattctgatttaaaa
ccaagtttcactatccaagcacatgaccaagacaaaggagtctcctccatctcatacaac
atttctgcacccaaccttttggctacggggtctatggataaaacggtaaagctttgggat
cttacaaacaatgaaccttcgtgccttgctttacacaaaccaaaagctggagctgtgttt
tccatttcctttgcggtggacaaccctttcttgcttgctattggtggctcaaagggagag
ctacatgtttgggatacactattggacgctgatgtctgtcgcaaatatggaagcaagcga
tcttga
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