Camelina sativa (false flax): 104731688
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Entry
104731688 CDS
T05044
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104731688
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
90S particles
Other 90S particles
104731688
Pre-60S particles
Other pre-60S particles
104731688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_Nup120_160
Beta-prop_WDR75_2nd
WD_LRWD1
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
104731688
NCBI-ProteinID:
XP_019089457
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Position
12:complement(14192507..14195392)
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AA seq
464 aa
AA seq
DB search
MITALSWIPKGAAKAIPDRAKLPSKEEIEKLKESCKIFNKEEEEENGEVAHAKAVAEEFG
KSSKSKSASPSMEVDDGLKELDMDNYDEEDDGIEIFSSGLGDLYYKSNEMDPYLKRNNDH
DDDSDDDSKILPTDLMIVCARSDSDNKETNCIDVYVFEETSVGSPNMYSHQNIIVPAIPL
CTAWLDCPLKGGEKGNFVAVGSDDTPIIEIWDLDVRFEVLPCVQLGGQNEEGNYKEGSHT
EPVLGLAWNKEFRNILASASADTKVKVWDVATGTCKITMDHHTDKVQAVAWNHYAPEVLL
SGSFDQTVVLKDGRQPSHSGVKWSVMSDVESLAWDPHSEHTFVVSLENGTVKGFDVRQAS
NSNPSFTLNGHDKAATSVSYNISAPNLLATASMDKTVKLWDLSNNEPSCIATHKPNAGSL
FSIAFSADNPFLLAMGGVKGTLKVWDTLSDTNVSNRYGTRPVRP
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgataactgcattgtcatggataccaaaaggggctgcaaaggctatacccgatcgtgct
aagcttccttctaaggaagaaatcgaaaagctcaaagagagttgtaaaattttcaataaa
gaagaagaagaagagaatggtgaagttgctcatgcgaaagccgtggcagaagagtttggg
aagtcatcgaaaagcaagagtgcttctccttcgatggaggttgatgatggtttgaaagaa
ctcgatatggataattacgatgaagaggatgatggaattgaaatttttagttccgggctt
ggggatctttactataagagtaacgagatggatccatatctcaagagaaataatgatcat
gatgatgactcggatgatgattcaaaaatcttaccaaccgatttaatgattgtctgcgct
aggagcgacagcgacaacaaagaaaccaactgtattgacgtttatgtattcgaggaaaca
tcggttggttctccaaatatgtatagtcatcaaaacataatcgtaccagcgattccgttg
tgtactgcttggcttgattgtccacttaaaggaggagaaaaaggcaatttcgtagctgtt
ggttcggatgatacgccaataatagagatatgggatcttgacgttaggttcgaggtgcta
ccttgtgtacaactaggaggacaaaacgaggaagggaactacaaagaaggtagccatact
gaaccagttcttggtcttgcttggaataaggagtttcggaatatacttgctagtgctagt
gccgacacaaaagtcaaagtttgggatgtcgctaccggaacatgcaagattacaatggat
catcacacagataaggttcaagcggttgcgtggaaccattatgctccagaagtgcttctc
agtgggtcctttgatcaaactgttgtattgaaagacggaagacaaccttcacattcgggt
gtcaaatggtctgtcatgtccgatgtcgaaagtttagcctgggatcctcatagtgaacac
acctttgtggtaagtctcgaaaatggaactgtaaagggttttgatgtacgccaagcctca
aattcaaacccgagtttcactctcaatggacatgataaagcagccacttccgtctcatac
aacatttcagcgcctaatcttttggcaacggcatctatggacaaaacagtaaagctttgg
gatctttcaaacaatgagccttcatgcattgccacacacaaaccaaatgctggaagttta
ttttccattgccttctctgccgacaatccattcttactcgctatgggtggcgtaaagggg
acgttaaaagtttgggatacactttcggacactaatgtctccaatagatacggaaccaga
cctgtccgaccgtga
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