Camelina sativa (false flax): 104731952
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Entry
104731952 CDS
T05044
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104731952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104731952
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104731952
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
SET1_RBD
Motif
Other DBs
NCBI-GeneID:
104731952
NCBI-ProteinID:
XP_010449765
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All DBs
Position
2:complement(21761111..21763998)
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AA seq
452 aa
AA seq
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MESDLGKLFVGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFSDPCVA
ERVIMLDKHIIDGRTVEAKKAVPRDDQQQVLKRHASPNHLMLSPVHGGGGARAKKIFVGG
LPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLLKTFHELN
GKLVEVKRAVPKEISPPASSNRSPLPLGVNYGGGLSNRMSANSYFNNFAPGPCFYNNLGG
SVGGRFSPVIGSGRHASSSFGLGLNLNPSYDGTTSTFGYNRVPSNPYFNGASPNRYTSPI
GHNRTDSPYNSNNRGLWGNRTDTAGPGWNLNENNRGNWGLPSSSSSAVANDNSGGYGRNF
GTGSGLTSSQFNGFEGSIGELYRGSSVYSDSTWQQQQQQQLPSQSSHELDNLSRSYGYDI
DNVGSDPSANDSEGYNGSYNVGSRQTNRGIEA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggaatcggatctggggaagctcttcgttggtgggatttcctgggatacagatgaagaa
aggttaagagactattttagcaactacggtgatgttgttgaagctgtgatcatgagagac
cgtgccactggccgtgctcgtggctttggtttcattgttttctctgatccttgtgttgct
gagagagtcatcatgctcgacaaacacatcatcgatggccgcacggttgaggcgaagaag
gccgtgcctcgagatgatcagcagcaggtgttaaaacgacacgctagtcctaaccacctt
atgttgtcacctgtccatggtggtggtggtgcaagggcaaagaagatctttgttggaggt
ttaccgtccagcattaccgaggaagagttcaagaactactttgatcagtttggtactatt
gctgatgttgtggttatgtatgatcataacacgcagaggccaagagggtttggcttcatt
acttttgattcagatgatgctgttgatagagttcttctcaagacctttcatgagctcaat
ggaaaactagtcgaggtcaaaagagcggtacctaaggagatttcccctcctgcttctagt
aaccgaagcccgcttcctctcggtgttaactatggtggtggcttgtctaataggatgtct
gctaatagctactttaacaactttgctcctggtccttgtttttataacaatctaggtggc
tctgttggtggtcggtttagtcctgttattggtagtggtagacatgcgtcttcttctttt
ggcctcggtttgaatttgaatcctagctatgatgggactacttctacatttggttataac
cgggttccaagcaacccttacttcaacggtgcttccccaaaccgttacacctctccaatc
gggcacaatagaactgattctccttacaattctaacaatagaggcttatggggaaacaga
accgatactgcaggtcccggttggaacttgaatgaaaacaacagaggaaactggggactt
ccttcttcttcttcttctgctgttgctaatgataacagtggcggctatggaagaaacttt
gggacaggttctggacttacctcgtcccaatttaacggttttgaaggttctataggggaa
ttgtacagagggagctcggtttacagcgactcaacgtggcagcaacagcaacagcagcag
ctaccatctcagtcttctcacgagctagacaatttgtctcgctcttacggctatgacatt
gacaatgtaggttcagacccatctgcaaatgactcagaaggatacaatggaagctacaat
gttggtagtagacaaactaatagaggtattgaggcatag
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