Camelina sativa (false flax): 104731955
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Entry
104731955 CDS
T05044
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
csat
Camelina sativa (false flax)
Pathway
csat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104731955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104731955
03036 Chromosome and associated proteins [BR:
csat03036
]
104731955
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
104731955
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
104731955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
ANAPC4_WD40
Beta-prop_EML
Beta-prop_RIG_2nd
EIF3I
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
Ge1_WD40
RMC1_N
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_RIG_1st
Beta-prop_SCAP
Beta-prop_SPT8
WDR54
CFAP43_N
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
104731955
NCBI-ProteinID:
XP_010449766
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All DBs
Position
12:16767279..16769817
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AA seq
456 aa
AA seq
DB search
MDAGMSTPSYLKAQTRCPLQEHFLPRKKTKENLDRFIPNRSAMNFDYAHYALMEGRKGKD
QSAAVSSPSKEAYRKQLAEIMNLNHTRILAFRNKPQAPVDLFPTDHSASLHLQPKSVKPR
RSIPQTSERTLDAPDIVDDFYLNLLDWGSANVLAIALDHTVYLWDASTGSTSELVTIDEE
KGPVTSINWAPDGRHVAIGLNNSEVQLWDSASYRQLRTLIGCHQSRVGSLAWNNHILTTG
GMDGQIVNNDVRIRSHIVETYRGHTQEICGLKWSGSGQQLASGGNDNVVHIWDRSVASSN
STTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDKTIKFWNTHTGACLNSVDTGSQV
CSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAA
GDETLRFWNVFGVPETTKKAAPKAAPEPFSHVNRIR
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggtatgagcactccttcttacttaaaggcgcagactcgttgccctcttcaa
gaacacttccttcccaggaaaaaaaccaaggaaaaccttgacaggttcatacccaacaga
tcagctatgaatttcgattatgcacactacgcccttatggaaggtagaaaaggtaaggat
caatcagcagcggtaagttcaccatccaaggaggcctacaggaagcagttggctgagatc
atgaacctcaaccacacccggatcctcgccttcagaaacaaacctcaagctcctgtagat
ctctttcccaccgatcactctgcttctcttcacctacagcctaaatctgtgaagcctcgc
agatccattcctcagacttctgagagaacattggatgcacctgacattgtggatgatttc
tacctcaacttgctcgattggggaagtgcaaatgtcttagccatagccttggaccacact
gtctacttatgggatgcttccactggttctacttctgagcttgtcacgattgatgaagag
aagggacctgtcacaagtatcaactgggcgcctgatggtcgtcatgttgctattggactc
aacaactctgaagtgcagctctgggattctgcttcttaccgtcaactgagaacattgatt
ggttgccaccaatcaagagtaggatcattggcatggaacaatcacatcctgactactgga
ggaatggacgggcagattgtcaacaacgatgtacgaatcagatcacatattgtggaaact
taccgaggtcacactcaagagatttgtggtctgaagtggtcaggatctggacagcaacta
gcgagtggtggcaacgacaatgtcgtgcacatatgggatcgttctgtcgcctcctcaaac
tcaaccacgcaatggttacacaggcttgaggaacatacatctgcagtgaaagctcttgcg
tggtgccctttccaagcgaatttgcttgcaactggtggtggtggaggagacaagaccatc
aagttctggaatactcacaccggagcttgcctgaattcagtagacactggttcccaagtt
tgttcgttgttatggagcaagaatgaaagagagttgcttagttcacatgggtttacacag
aatcagcttacactttggaagtacccatccatggtgaaaatggctgagctcactggtcat
acatcaagagtcctatatatggctcagagtccggatggttgtaccgtggcttcagcagca
ggagacgagactctgagattttggaatgtttttggagtaccagagaccacaaaaaaagct
gctccaaaagctgctccggagccattttctcatgtgaatcgtattcgttga
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